RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 FCF1Q9Y324 198 aaKnown RBP16.61■□□□□ 0.25
PFN1-203ENST00000574872 PCDHA3Q9Y5H8 950 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 NUP205Q92621 2012 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 CACNA1HO95180 2353 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 MUC6Q6W4X9 2439 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 J3KR12 359 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 ATP9BO43861 1147 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 ALDH1A2O94788 518 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 ZRANB2O95218 330 aaKnown RBP eCLIP16.6■□□□□ 0.25
PFN1-203ENST00000574872 KRT10P13645 584 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 SERPINB6P35237 376 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 CDKN2BP42772 138 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 SERPINH1P50454 418 aaKnown RBP16.6■□□□□ 0.25
PFN1-203ENST00000574872 TCF15Q12870 199 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 DLG2Q15700 870 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 KAZNQ674X7 775 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 SPOCD1Q6ZMY3 1216 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 Q6ZVU0 165 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 LZTR1Q8N653 840 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 KDM1BQ8NB78 822 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 MDGA1Q8NFP4 955 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 ALG3Q92685 438 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 ALS2CR12Q96Q35 445 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 TPSD1Q9BZJ3 242 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 TNKS2Q9H2K2 1166 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 PRSS16Q9NQE7 514 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 SUN2Q9UH99 717 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 RAPGEFL1Q9UHV5 662 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 CHD5Q8TDI0 1954 aa16.6■□□□□ 0.25
PFN1-203ENST00000574872 EDDM13A0A1B0GTR0 161 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 CCDC66A2RUB6 948 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 APOL1O14791 398 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 ZBTB24O43167 697 aaPredicted RBP16.59■□□□□ 0.25
PFN1-203ENST00000574872 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 CD160O95971 181 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 GABRG2P18507 467 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 NDUFV2P19404 249 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 RWDD2BP57060 319 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 GBE1Q04446 702 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 CAMK2GQ13555 558 aaPredicted RBP16.59■□□□□ 0.25
PFN1-203ENST00000574872 PAFAH1B3Q15102 231 aaKnown RBP16.59■□□□□ 0.25
PFN1-203ENST00000574872 C9orf64Q5T6V5 341 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 C22orf39Q6P5X5 142 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 KIAA1324Q6UXG2 1013 aaKnown RBP16.59■□□□□ 0.25
PFN1-203ENST00000574872 REXO1L1PQ8IX06 675 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 RCOR2Q8IZ40 523 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 STK40Q8N2I9 435 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 CAMKK1Q8N5S9 505 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 UBL4BQ8N7F7 174 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 EXD1Q8NHP7 514 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 FRS2Q8WU20 508 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 LRRN4Q8WUT4 740 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 RBM41Q96IZ5 413 aaKnown RBP16.59■□□□□ 0.25
PFN1-203ENST00000574872 MKRN2Q9H000 416 aaKnown RBP16.59■□□□□ 0.25
PFN1-203ENST00000574872 SP110Q9HB58 689 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 HCN4Q9Y3Q4 1203 aa16.59■□□□□ 0.25
PFN1-203ENST00000574872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
PFN1-203ENST00000574872 NYNRINQ9P2P1 1898 aaKnown RBP16.59■□□□□ 0.25
PFN1-203ENST00000574872 CKAP5Q14008 2032 aa16.58■□□□□ 0.25
PFN1-203ENST00000574872 ZNF487B1APH4 448 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 AXIN1O15169 862 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 DDX3YO15523 660 aaKnown RBP16.58■□□□□ 0.24
PFN1-203ENST00000574872 PRAMEF11O60813 436 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 TMCC1O94876 653 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 PEX5P50542 639 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 CLCN6P51797 869 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 COPAP53621 1224 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 ZNF211Q13398 564 aaPredicted RBP16.58■□□□□ 0.24
PFN1-203ENST00000574872 SLC9A4Q6AI14 798 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 AADACL2Q6P093 401 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 NPNTQ6UXI9 565 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 VSIG1Q86XK7 387 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 ATPAF2Q8N5M1 289 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 PLD5Q8N7P1 536 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 OR2T3Q8NH03 318 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 PTPRN2Q92932 1015 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 MRGPRX1Q96LB2 322 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 PRRX2Q99811 253 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 HEMGNQ9BXL5 484 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 TM6SF2Q9BZW4 377 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 PDFQ9HBH1 243 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 UBA2Q9UBT2 640 aaPredicted RBP16.58■□□□□ 0.24
PFN1-203ENST00000574872 IPO11Q9UI26 975 aaKnown RBP16.58■□□□□ 0.24
PFN1-203ENST00000574872 HEY1Q9Y5J3 304 aa16.58■□□□□ 0.24
PFN1-203ENST00000574872 hCG_1818297A0A087WSY0 165 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 TARSL2A2RTX5 802 aaKnown RBP16.57■□□□□ 0.24
PFN1-203ENST00000574872 ZSCAN5CA6NGD5 496 aaPredicted RBP16.57■□□□□ 0.24
PFN1-203ENST00000574872 USP27XA6NNY8 438 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 MIF4GDA9UHW6 222 aaKnown RBP16.57■□□□□ 0.24
PFN1-203ENST00000574872 PYGMP11217 842 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
PFN1-203ENST00000574872 GEMIN4P57678 1058 aaKnown RBP16.57■□□□□ 0.24
PFN1-203ENST00000574872 SLC20A2Q08357 652 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 ADCY2Q08462 1091 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 SLC10A2Q12908 348 aaPredicted RBP16.57■□□□□ 0.24
PFN1-203ENST00000574872 TAZQ16635 292 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 ZNF528Q3MIS6 628 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 TFDP3Q5H9I0 405 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
PFN1-203ENST00000574872 TMPRSS6Q8IU80 811 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms