RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 RBM41Q96IZ5 413 aaKnown RBP33.81■■■■□ 3
CTDNEP1-209ENST00000574205 EBF1Q9UH73 591 aa33.81■■■■□ 3
CTDNEP1-209ENST00000574205 EDDM13A0A1B0GTR0 161 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 TARSL2A2RTX5 802 aaKnown RBP33.8■■■■□ 3
CTDNEP1-209ENST00000574205 MIF4GDA9UHW6 222 aaKnown RBP33.8■■■■□ 3
CTDNEP1-209ENST00000574205 ZBTB24O43167 697 aaPredicted RBP33.8■■■■□ 3
CTDNEP1-209ENST00000574205 FTCDO95954 541 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 DLG2Q15700 870 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 ANO7Q6IWH7 933 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 MDGA1Q8NFP4 955 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 UBE2Q2Q8WVN8 375 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 ALS2CR12Q96Q35 445 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 MAK16Q9BXY0 300 aaKnown RBP33.8■■■■□ 3
CTDNEP1-209ENST00000574205 PRDM16Q9HAZ2 1276 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 PRSS16Q9NQE7 514 aa33.8■■■■□ 3
CTDNEP1-209ENST00000574205 CCDC163A0A0D9SF12 145 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 DFFAO00273 331 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 ZSCAN12O43309 604 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 CDKN2BP42772 138 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 TCF15Q12870 199 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 TRAF3IP1Q8TDR0 691 aaPredicted RBP33.79■■■■□ 3
CTDNEP1-209ENST00000574205 NELL1Q92832 810 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 PTPRN2Q92932 1015 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 ERLEC1Q96DZ1 483 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 FBRSQ9HAH7 460 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 MUC6Q6W4X9 2439 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 K7ERQ8 282 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 CD160O95971 181 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 PEX5P50542 639 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 RWDD2BP57060 319 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 TAZQ16635 292 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 SPOCD1Q6ZMY3 1216 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 METTL3Q86U44 580 aaKnown RBP33.79■■■■□ 3
CTDNEP1-209ENST00000574205 NETO2Q8NC67 525 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 HMGB4Q8WW32 186 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 MTG2Q9H4K7 406 aa33.79■■■■□ 3
CTDNEP1-209ENST00000574205 H0Y858 1186 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 GABRG2P18507 467 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 PXNP49023 591 aaPredicted RBP33.78■■■■□ 3
CTDNEP1-209ENST00000574205 TFDP3Q5H9I0 405 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 C9orf64Q5T6V5 341 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 SLC9A4Q6AI14 798 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 TP53INP2Q8IXH6 220 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 UBL4BQ8N7F7 174 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 OR2T3Q8NH03 318 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 CEP44Q9C0F1 390 aa33.78■■■■□ 3
CTDNEP1-209ENST00000574205 BCCIPQ9P287 314 aaKnown RBP eCLIP33.78■■■■□ 3
CTDNEP1-209ENST00000574205 SMAD6O43541 496 aaKnown RBP33.77■■■■□ 3
CTDNEP1-209ENST00000574205 MFSD11O43934 449 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 PRAMEF11O60813 436 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 SIN3BO75182 1162 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 COPAP53621 1224 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 DMWDQ09019 674 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 CCDC50Q8IVM0 306 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 CASKIN2Q8WXE0 1202 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 MKRN2Q9H000 416 aaKnown RBP33.77■■■■□ 3
CTDNEP1-209ENST00000574205 IRF2BPLQ9H1B7 796 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 PDFQ9HBH1 243 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 PACSIN2Q9UNF0 486 aaPredicted RBP33.77■■■■□ 3
CTDNEP1-209ENST00000574205 ACTL7AQ9Y615 435 aa33.77■■■■□ 3
CTDNEP1-209ENST00000574205 VAV1P15498 845 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 ZFXP17010 805 aaPredicted RBP33.76■■■■□ 3
CTDNEP1-209ENST00000574205 NDUFV2P19404 249 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 COPS2P61201 443 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 INO80DQ53TQ3 878 aaPredicted RBP33.76■■■■□ 3
CTDNEP1-209ENST00000574205 HEATR6Q6AI08 1181 aaKnown RBP33.76■■■■□ 3
CTDNEP1-209ENST00000574205 C22orf39Q6P5X5 142 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 LONP2Q86WA8 852 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 RFX6Q8HWS3 928 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 LRRC49Q8IUZ0 686 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 PLD5Q8N7P1 536 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 TRIM58Q8NG06 486 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 ALG3Q92685 438 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 HES6Q96HZ4 224 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 MRGPRX1Q96LB2 322 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 SP110Q9HB58 689 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 ZSCAN32Q9NX65 697 aa33.76■■■■□ 3
CTDNEP1-209ENST00000574205 IPO11Q9UI26 975 aaKnown RBP33.76■■■■□ 3
CTDNEP1-209ENST00000574205 J3KR12 359 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 APOL1O14791 398 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 AXIN1O15169 862 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 PTPN5P54829 565 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 LEKR1Q6ZMV7 388 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 Q6ZVU0 165 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 TMPRSS6Q8IU80 811 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 PGBD3Q8N328 593 aa33.75■■■□□ 2.99
CTDNEP1-209ENST00000574205 FNTBP49356 437 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 IL10RBQ08334 325 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 TFDP2Q14188 446 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 ELAVL3Q14576 367 aaKnown RBP33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 PPP2R5EQ16537 467 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 WDR5BQ86VZ2 330 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 REXO1L1PQ8IX06 675 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 ATPAF2Q8N5M1 289 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 PCDH20Q8N6Y1 951 aaKnown RBP33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 ISG20Q96AZ6 181 aaKnown RBP33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 CCDC114Q96M63 670 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 UBA2Q9UBT2 640 aaPredicted RBP33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 FCF1Q9Y324 198 aaKnown RBP33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 hCG_1818297A0A087WSY0 165 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms