RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 WDFY3Q8IZQ1 3526 aa17.73■□□□□ 0.43
SMG6-212ENST00000573153 ILVBLA1L0T0 632 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 SYCE3A1L190 88 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 CCP110O43303 1012 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 PLRG1O43660 514 aaKnown RBP17.72■□□□□ 0.43
SMG6-212ENST00000573153 RNASEH1O60930 286 aaKnown RBP17.72■□□□□ 0.43
SMG6-212ENST00000573153 RTN2O75298 545 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 IL1BP01584 269 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 RRM1P23921 792 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 SDC4P31431 198 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 RPL7AP62424 266 aaKnown RBP17.72■□□□□ 0.43
SMG6-212ENST00000573153 SCAPQ12770 1279 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 NR1I3Q14994 352 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 SHBQ15464 509 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 CDO1Q16878 200 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 ZNF423Q2M1K9 1284 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 FIGNQ5HY92 759 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 PIP5KL1Q5T9C9 394 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 PPP1R2P3Q6NXS1 205 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 C22orf39Q6P5X5 142 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 LRRC31Q6UY01 552 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 LINGO4Q6UY18 593 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 NTAN1Q96AB6 310 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 ARRDC3Q96B67 414 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 ACE2Q9BYF1 805 aaPredicted RBP17.72■□□□□ 0.43
SMG6-212ENST00000573153 ZYG11BQ9C0D3 744 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 NOL6Q9H6R4 1146 aaKnown RBP17.72■□□□□ 0.43
SMG6-212ENST00000573153 TOR4AQ9NXH8 423 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 AIPL1Q9NZN9 384 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 SLC25A13Q9UJS0 675 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 NCKAP1Q9Y2A7 1128 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 ANKRD6Q9Y2G4 727 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 ZFHX4Q86UP3 3567 aa17.72■□□□□ 0.43
SMG6-212ENST00000573153 SIGLEC16A6NMB1 481 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 H0Y8X5 98 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 KCNK3O14649 394 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 SRGAP2O75044 1071 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 LRIG2O94898 1065 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 DKK1O94907 266 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 KRT3P12035 628 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 ACVRL1P37023 503 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 NNMTP40261 264 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 PRKCIP41743 596 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 RACK1P63244 317 aaKnown RBP17.71■□□□□ 0.43
SMG6-212ENST00000573153 SIM1P81133 766 aaPredicted RBP17.71■□□□□ 0.43
SMG6-212ENST00000573153 CNTN1Q12860 1018 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 SFSWAPQ12872 951 aaKnown RBP17.71■□□□□ 0.43
SMG6-212ENST00000573153 FOXC1Q12948 553 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 C6orf118Q5T5N4 469 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 ZNF783Q6ZMS7 281 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 GLRX5Q86SX6 157 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 DNAAF5Q86Y56 855 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 MCOLN2Q8IZK6 566 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 PIP4K2CQ8TBX8 421 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 FAM172AQ8WUF8 416 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 OR8D1Q8WZ84 308 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 VCPIP1Q96JH7 1222 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 C2orf49Q9BVC5 232 aaPredicted RBP17.71■□□□□ 0.43
SMG6-212ENST00000573153 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 CBX8Q9HC52 389 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 TM7SF3Q9NS93 570 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 TMEM248Q9NWD8 314 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 BTBD3Q9Y2F9 522 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 PCDHGB2Q9Y5G2 931 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 WASF2Q9Y6W5 498 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 DOCK9Q9BZ29 2069 aa17.71■□□□□ 0.43
SMG6-212ENST00000573153 FAM47DPA6NHR8 397 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 LRRC53A6NM62 1247 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 VILLO15195 856 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 SLC7A4O43246 635 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 GPD1P21695 349 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 OR1E1P30953 314 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 PBX1P40424 430 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 CLCN6P51797 869 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 GNA12Q03113 381 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 POM121L1PQ3SYA9 428 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 ACAD10Q6JQN1 1059 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 IL27RAQ6UWB1 636 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.7■□□□□ 0.42
SMG6-212ENST00000573153 PYROXD2Q8N2H3 581 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 ARFGAP1Q8N6T3 406 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 GATA6Q92908 595 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 OMDQ99983 421 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 SLC32A1Q9H598 525 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 OR12D3Q9UGF7 316 aa17.7■□□□□ 0.42
SMG6-212ENST00000573153 CXorf51AA0A1B0GTR3 108 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 FAM221BA6H8Z2 402 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 LRRC72A6NJI9 287 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 HYAL3O43820 417 aaPredicted RBP17.69■□□□□ 0.42
SMG6-212ENST00000573153 CER1O95813 267 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 RHOQP17081 205 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 SERPINH1P50454 418 aaKnown RBP17.69■□□□□ 0.42
SMG6-212ENST00000573153 ZNF143P52747 638 aaPredicted RBP17.69■□□□□ 0.42
SMG6-212ENST00000573153 KRT83P78385 493 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 ARL13BQ3SXY8 428 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 DPY19L3Q6ZPD9 716 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 CYP4V2Q6ZWL3 525 aaPredicted RBP17.69■□□□□ 0.42
SMG6-212ENST00000573153 RAB44Q7Z6P3 723 aaPredicted RBP17.69■□□□□ 0.42
SMG6-212ENST00000573153 TRIM69Q86WT6 500 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 DRC7Q8IY82 874 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms