RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 MEI1Q5TIA1 1274 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 PIK3R6Q5UE93 754 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 TTC39BQ5VTQ0 682 aaPredicted RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 OTUD1Q5VV17 481 aaPredicted RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 MBLAC2Q68D91 279 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 SLC23A3Q6PIS1 610 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 NT5DC3Q86UY8 548 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 ADIPOR2Q86V24 386 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 CHSY1Q86X52 802 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 TMPRSS6Q8IU80 811 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 KATNAL2Q8IYT4 538 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 SLC35F6Q8N357 371 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 CARNMT1Q8N4J0 409 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 ZCCHC9Q8N567 271 aaKnown RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.16□□□□□ -0.46
NDE1-206ENST00000572967 ZNF557Q8N988 423 aaPredicted RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 DEFB124Q8NES8 71 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 SNX19Q92543 992 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 SIPA1Q96FS4 1042 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 TOE1Q96GM8 510 aaKnown RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 SLC39A13Q96H72 371 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 C16orf45Q96MC5 204 aaPredicted RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 GPR174Q9BXC1 333 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 TKTL2Q9H0I9 626 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 RETREG1Q9H6L5 497 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.16□□□□□ -0.46
NDE1-206ENST00000572967 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 PCSK1NQ9UHG2 260 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 AP4E1Q9UPM8 1137 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 PCDHA3Q9Y5H8 950 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 SPTBN2O15020 2390 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 NUMA1Q14980 2115 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 NCOR2Q9Y618 2525 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 ASCC3Q8N3C0 2202 aaKnown RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 LRRD1A4D1F6 860 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 KCNU1A8MYU2 1149 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 ZNF487B1APH4 448 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 F5H5T6 163 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 ZRANB2O95218 330 aaKnown RBP eCLIP12.15□□□□□ -0.46
NDE1-206ENST00000572967 COPS2P61201 443 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 NRG1Q02297 640 aaPredicted RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 EIF4EBP2Q13542 120 aaPredicted RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 TUBB2AQ13885 445 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 DPYSL2Q16555 572 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 PTPRNQ16849 979 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 PLEKHG6Q3KR16 790 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 RAP1GAP2Q684P5 730 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 CIR1Q86X95 450 aaPredicted RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 CCDC117Q8IWD4 279 aaPredicted RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 RCOR2Q8IZ40 523 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 LGI2Q8N0V4 545 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 CFAP52Q8N1V2 620 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 C17orf53Q8N3J3 647 aaPredicted RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 MINDY1Q8N5J2 469 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 KCTD6Q8NC69 237 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 OR2T3Q8NH03 318 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 EXD1Q8NHP7 514 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 HES6Q96HZ4 224 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 C1orf74Q96LT6 269 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 NAP1L3Q99457 506 aaPredicted RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 SNRNP25Q9BV90 132 aaKnown RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 TUBB2BQ9BVA1 445 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 MIR1-1HGQ9H1L0 117 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 OSBPL2Q9H1P3 480 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 CARD9Q9H257 536 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 CAPN10Q9HC96 672 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 WSB2Q9NYS7 404 aaPredicted RBP12.15□□□□□ -0.46
NDE1-206ENST00000572967 DNAI1Q9UI46 699 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 ANGPTL2Q9UKU9 493 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 FZD10Q9ULW2 581 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 HYOU1Q9Y4L1 999 aa12.15□□□□□ -0.46
NDE1-206ENST00000572967 CES2O00748 559 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 FGF10O15520 208 aaPredicted RBP12.14□□□□□ -0.47
NDE1-206ENST00000572967 ZNF500O60304 480 aaPredicted RBP12.14□□□□□ -0.47
NDE1-206ENST00000572967 LUC7L3O95232 432 aaKnown RBP12.14□□□□□ -0.47
NDE1-206ENST00000572967 SERPINF2P08697 491 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 TNNT1P13805 278 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 POLR2EP19388 210 aaKnown RBP12.14□□□□□ -0.47
NDE1-206ENST00000572967 TFE3P19532 575 aaPredicted RBP12.14□□□□□ -0.47
NDE1-206ENST00000572967 L1CAMP32004 1257 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 CDH6P55285 790 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 FOXC1Q12948 553 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 CAMK2GQ13555 558 aaPredicted RBP12.14□□□□□ -0.47
NDE1-206ENST00000572967 E2F5Q15329 346 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 MS4A13Q5J8X5 152 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 SYCP2LQ5T4T6 812 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 DCAF12L1Q5VU92 463 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 RABEPKQ7Z6M1 372 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 CCDC50Q8IVM0 306 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 HDDC3Q8N4P3 179 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 KIF18AQ8NI77 898 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 CEP76Q8TAP6 659 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.14□□□□□ -0.47
NDE1-206ENST00000572967 MAIP1Q8WWC4 291 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 HSPH1Q92598 858 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 FOXJ1Q92949 421 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 PBKQ96KB5 322 aa12.14□□□□□ -0.47
NDE1-206ENST00000572967 ZNF670Q9BS34 389 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms