RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PCDH19Q8TAB3 1148 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 CCDC26Q8TAB7 109 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 GAB3Q8WWW8 586 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 KRT35Q92764 455 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 FAF2Q96CS3 445 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 ZNF419Q96HQ0 510 aaPredicted RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 HERPUD2Q9BSE4 406 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 FAM126AQ9BYI3 521 aaPredicted RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 DUSP15Q9H1R2 295 aaPredicted RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 EPC1Q9H2F5 836 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 TNKS2Q9H2K2 1166 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 KCNF1Q9H3M0 494 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 PDFQ9HBH1 243 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 USP36Q9P275 1121 aaKnown RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 BCCIPQ9P287 314 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMG6-209ENST00000571442 CYP8B1Q9UNU6 501 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 PLA2G4CQ9UP65 541 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 HS3ST2Q9Y278 367 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 ADGRG1Q9Y653 693 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 ALG6Q9Y672 507 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 GON4LQ3T8J9 2241 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ANKRD36A6QL64 1941 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 A0A0A6YYK5 440 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 CCDC163A0A0D9SF12 145 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 H3BRJ5 948 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 NPC1O15118 1278 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 MUSKO15146 869 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 MID1O15344 667 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 INSIG1O15503 277 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 FGF10O15520 208 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 KDELR3O43731 214 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 MFSD11O43934 449 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 BNIP3LO60238 219 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SYNCRIPO60506 623 aaKnown RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 RPP40O75818 363 aaKnown RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 PEX11BO96011 259 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 LMNAP02545 664 aaKnown RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 KDELR1P24390 212 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ID4P47928 161 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 HCAR3P49019 387 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SERPINH1P50454 418 aaKnown RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 VASPP50552 380 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 PAPOLAP51003 745 aaKnown RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 OXCT1P55809 520 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 GSDMDP57764 484 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ST8SIA6P61647 398 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 FOXK2Q01167 660 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SULT2A1Q06520 285 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SLC10A2Q12908 348 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 SERINC3Q13530 473 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SIM2Q14190 667 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 KRT81Q14533 505 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 STARD3Q14849 445 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 CYTH1Q15438 398 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 CCDC6Q16204 474 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 POM121L1PQ3SYA9 428 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 PLK5Q496M5 336 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ACCSLQ4AC99 568 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ATXN7L2Q5T6C5 722 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 SDE2Q6IQ49 451 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 AADACL2Q6P093 401 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 C22orf39Q6P5X5 142 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ZNF783Q6ZMS7 281 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 PRR23BQ6ZRT6 265 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 MMAAQ8IVH4 418 aaKnown RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 SLC41A1Q8IVJ1 513 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 PGBD3Q8N328 593 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 AADATQ8N5Z0 425 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 LRRC57Q8N9N7 239 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ATP11CQ8NB49 1132 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 KDM1BQ8NB78 822 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 OR2A12Q8NGT7 310 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 OR6K2Q8NGY2 324 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 RNF25Q96BH1 459 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 SIPA1Q96FS4 1042 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 ZNF830Q96NB3 372 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 TM6SF2Q9BZW4 377 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 RSPH9Q9H1X1 276 aaPredicted RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 MAGEH1Q9H213 219 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SMOC1Q9H4F8 434 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 CATSPERBQ9H7T0 1116 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 PRDM16Q9HAZ2 1276 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 LHX3Q9UBR4 397 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SLC25A13Q9UJS0 675 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
SMG6-209ENST00000571442 SLCO1B1Q9Y6L6 691 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 CAPN6Q9Y6Q1 641 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 DMXL1Q9Y485 3027 aa7.13□□□□□ -1.27
SMG6-209ENST00000571442 NCOR2Q9Y618 2525 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 DCHS1Q96JQ0 3298 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TPRP12270 2363 aaKnown RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 RALGAPA1Q6GYQ0 2036 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 ATXN2Q99700 1313 aaKnown RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 EDDM13A0A1B0GTR0 161 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 A0A1W2PP55 124 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 MACROD2A1Z1Q3 448 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TTC24A2A3L6 582 aaPredicted RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 TARSL2A2RTX5 802 aaKnown RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 LRRD1A4D1F6 860 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms