RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SFSWAPQ12872 951 aaKnown RBP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 C22orf39Q6P5X5 142 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 ZCCHC9Q8N567 271 aaKnown RBP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 ATP11CQ8NB49 1132 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 C1orf216Q8TAB5 229 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 GANCQ8TET4 914 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 ARHGEF2Q92974 986 aaKnown RBP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 FAM131CQ96AQ9 280 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 BIRC7Q96CA5 298 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 PEBP4Q96S96 227 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 OMDQ99983 421 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 SPON2Q9BUD6 331 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 ACE2Q9BYF1 805 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 NEUROG2Q9H2A3 272 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 ARHGAP20Q9P2F6 1191 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 EIF2B4Q9UI10 523 aaKnown RBP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 SARDHQ9UL12 918 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.287e-9■□□□□ 11.2
CNOT1-220ENST00000569916 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 CACNA1EQ15878 2313 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 A0A087X0T9 212 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 A0A1B0GTW7 788 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-220ENST00000569916 CREB3O43889 395 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 BNIP3LO60238 219 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 CD160O95971 181 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 IGHV4-34P06331 123 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 CTSLP07711 333 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 FAM228BP0C875 321 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 GNSP15586 552 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 EPHB2P29323 1055 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 HNRNPH3P31942 346 aaKnown RBP13.32□□□□□ -0.28
CNOT1-220ENST00000569916 ACVRL1P37023 503 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 ETFBP38117 255 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 MAPK8P45983 427 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 SERPINH1P50454 418 aaKnown RBP13.32□□□□□ -0.28
CNOT1-220ENST00000569916 GALCP54803 685 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 GFPT1Q06210 699 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-220ENST00000569916 KIAA0895LQ68EN5 471 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 RETSATQ6NUM9 610 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 CYP4V2Q6ZWL3 525 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-220ENST00000569916 DSG4Q86SJ6 1040 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 VPS36Q86VN1 386 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 HDDC3Q8N4P3 179 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 RTL3Q8N8U3 475 aaKnown RBP13.32□□□□□ -0.28
CNOT1-220ENST00000569916 OR2A12Q8NGT7 310 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 SNX19Q92543 992 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 EPAS1Q99814 870 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 ORAI3Q9BRQ5 295 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 MIR1-1HGQ9H1L0 117 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 MAGEH1Q9H213 219 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 NOL6Q9H6R4 1146 aaKnown RBP13.32□□□□□ -0.28
CNOT1-220ENST00000569916 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 PPM1HQ9ULR3 514 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 NENFQ9UMX5 172 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 AP4E1Q9UPM8 1137 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 ACTL7AQ9Y615 435 aa13.32□□□□□ -0.28
CNOT1-220ENST00000569916 CXorf51AA0A1B0GTR3 108 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 WASH4PA8MWX3 477 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 C1QTNF3-AMACRE9PGA6 284 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 PLK4O00444 970 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 ARHGAP33O14559 1287 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 BCAT2O15382 392 aaPredicted RBP13.31□□□□□ -0.28
CNOT1-220ENST00000569916 RAMP2O60895 175 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 LRCH4O75427 683 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 ZNF821O75541 412 aaPredicted RBP13.31□□□□□ -0.28
CNOT1-220ENST00000569916 FSBPO95073 299 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 GOT1P17174 413 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 ADPRHP54922 357 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 FOXK2Q01167 660 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 TRIM14Q14142 442 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 CA9Q16790 459 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 FAM46CQ5VWP2 391 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 NCEH1Q6PIU2 408 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 VSTM4Q8IW00 320 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 CHST14Q8NCH0 376 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 OR2T34Q8NGX1 318 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 PIP4K2CQ8TBX8 421 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 SNRNP25Q9BV90 132 aaKnown RBP13.31□□□□□ -0.28
CNOT1-220ENST00000569916 GTPBP2Q9BX10 602 aaKnown RBP13.31□□□□□ -0.28
CNOT1-220ENST00000569916 CEP44Q9C0F1 390 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 THAP2Q9H0W7 228 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 TNKS2Q9H2K2 1166 aa13.31□□□□□ -0.28
CNOT1-220ENST00000569916 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
CNOT1-220ENST00000569916 FAM47DPA6NHR8 397 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 LRRC72A6NJI9 287 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 RNF103O00237 685 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 FGF10O15520 208 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 RNF8O76064 485 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 SYPP08247 313 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 CD27P26842 260 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 MIPP30301 263 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 CHRNA3P32297 505 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 HTR7P34969 479 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 TPI1P60174 286 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 BNC1Q01954 994 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 SLC20A2Q08357 652 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms