RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 ALFQ53S48 1182 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 ARHGAP40Q5TG30 622 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 OTUD1Q5VV17 481 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-220ENST00000569827 FAM46CQ5VWP2 391 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 CRTC1Q6UUV9 634 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 GCNT7Q6ZNI0 430 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 PTAR1Q7Z6K3 402 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-220ENST00000569827 DSG4Q86SJ6 1040 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 TMEM110Q86TL2 294 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 TRIM59Q8IWR1 403 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 WDTC1Q8N5D0 677 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
CAPN3-220ENST00000569827 SPATA20Q8TB22 786 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 RFFLQ8WZ73 363 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 APOLD1Q96LR9 279 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 SLC2A13Q96QE2 648 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 SEMA4CQ9C0C4 833 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 THAP9Q9H5L6 903 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 AJAP1Q9UKB5 411 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-220ENST00000569827 ZFR2Q9UPR6 939 aaKnown RBP12.38□□□□□ -0.43
CAPN3-220ENST00000569827 DMTF1Q9Y222 760 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 OR51B4Q9Y5P0 310 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 LY6G6EA0A0G2JKS1 128 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 MCF2LO15068 1137 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 SLC7A4O43246 635 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 MAGEC1O60732 1142 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 USP12O75317 370 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 PIAS2O75928 621 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 PCDH8O95206 1070 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 AFPP02771 609 aaKnown RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ERBB2P04626 1255 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 CDK4P11802 303 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 CCR1P32246 355 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 CDK17Q00537 523 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 CETN1Q12798 172 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF177Q13360 481 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ILKQ13418 452 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 STIM1Q13586 685 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 SLC12A1Q13621 1099 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 DRAP1Q14919 205 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF284Q2VY69 593 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 TAF1BQ53T94 588 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 TTC39BQ5VTQ0 682 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 TFAP2DQ7Z6R9 452 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF605Q86T29 641 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 IQCHQ86VS3 1027 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 CREBRFQ8IUR6 639 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ATP11CQ8NB49 1132 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 OR2A12Q8NGT7 310 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 OR4C6Q8NH72 309 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 DHTKD1Q96HY7 919 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 DNAJC28Q9NX36 388 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 SLC12A6Q9UHW9 1150 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 VPS51Q9UID3 782 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 CNTN6Q9UQ52 1028 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ACTL7AQ9Y615 435 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 U3KQA8 63 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 ARHGEF17Q96PE2 2063 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-220ENST00000569827 MAST4O15021 2626 aa12.37□□□□□ -0.43
CAPN3-220ENST00000569827 HECTD1Q9ULT8 2610 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 A0A0D9SEW6 157 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 A0A1W2PNU3 283 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-220ENST00000569827 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 CYSRT1A8MQ03 144 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 M0QYT0 321 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 PMM2O15305 246 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 RAD51BO15315 384 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 P4HA2O15460 535 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 MED7O43513 233 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 OPA1O60313 960 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 ADCY5O95622 1261 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 RHOCP08134 193 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 SLC9A1P19634 815 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 CHRNA3P32297 505 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 CFHR1Q03591 330 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 LY6DQ14210 128 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 FGL2Q14314 439 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 ARSIQ5FYB1 569 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 C3orf38Q5JPI3 329 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 TPRG1LQ5T0D9 272 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 BEND5Q7L4P6 421 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 HORMAD1Q86X24 394 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 OR7D4Q8NG98 312 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 STK32AQ8WU08 396 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 PPP1R13BQ96KQ4 1090 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 MED15Q96RN5 788 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 TRIM62Q9BVG3 475 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 SRRTQ9BXP5 876 aaKnown RBP12.36□□□□□ -0.43
CAPN3-220ENST00000569827 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 PREBQ9HCU5 417 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 PIGVQ9NUD9 493 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 KLHL11Q9NVR0 708 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms