RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 PECAM1P16284 738 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-212ENST00000569575 EIF3EP60228 445 aaKnown RBP23.93■■□□□ 1.42
RAB40C-212ENST00000569575 CKAP4Q07065 602 aaKnown RBP23.93■■□□□ 1.42
RAB40C-212ENST00000569575 ENPP2Q13822 863 aa23.93■■□□□ 1.42
RAB40C-212ENST00000569575 PRKD1Q15139 912 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-212ENST00000569575 SLC45A4Q5BKX6 768 aa23.93■■□□□ 1.42
RAB40C-212ENST00000569575 SDE2Q6IQ49 451 aa23.93■■□□□ 1.42
RAB40C-212ENST00000569575 TRIM67Q6ZTA4 783 aa23.93■■□□□ 1.42
RAB40C-212ENST00000569575 RUNDC3BQ96NL0 473 aa23.93■■□□□ 1.42
RAB40C-212ENST00000569575 FBRSL1Q9HCM7 1045 aaKnown RBP23.93■■□□□ 1.42
RAB40C-212ENST00000569575 UBA2Q9UBT2 640 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-212ENST00000569575 SUN2Q9UH99 717 aa23.93■■□□□ 1.42
RAB40C-212ENST00000569575 CCDC188H7C350 402 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 ATP9BO43861 1147 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 RBP3P10745 1247 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 CES1P23141 567 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 KIR2DL1P43626 348 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-212ENST00000569575 SERPINH1P50454 418 aaKnown RBP23.92■■□□□ 1.42
RAB40C-212ENST00000569575 ARF5P84085 180 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 LLGL1Q15334 1064 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 CYP1B1Q16678 543 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 WHAMMP3Q1A5X7 153 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 ZNF687Q8N1G0 1237 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 C12orf50Q8NA57 414 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-212ENST00000569575 MAML1Q92585 1016 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 ZNF592Q92610 1267 aa23.92■■□□□ 1.42
RAB40C-212ENST00000569575 QKIQ96PU8 341 aaKnown RBP eCLIP23.92■■□□□ 1.42
RAB40C-212ENST00000569575 H7C0C1 242 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 KRIT1O00522 736 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 URI1O94763 535 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 STK10O94804 968 aaKnown RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 ITGAVP06756 1048 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 CHRNB1P11230 501 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 RPS9P46781 194 aaKnown RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 ATP5OP48047 213 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 IFI35P80217 286 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 NSUN2Q08J23 767 aaKnown RBP eCLIP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 BYSLQ13895 437 aaKnown RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 SIX1Q15475 284 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 RALGPS1Q5JS13 557 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 IER5LQ5T953 404 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 MARC1Q5VT66 337 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 HEATR6Q6AI08 1181 aaKnown RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 NPNTQ6UXI9 565 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 SH2D3CQ8N5H7 860 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 ZNF513Q8N8E2 541 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 CLDN23Q96B33 292 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 MS4A14Q96JA4 679 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 CCDC114Q96M63 670 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 TBC1D17Q9HA65 648 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 SAE1Q9UBE0 346 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-212ENST00000569575 SEPT3Q9UH03 358 aa23.91■■□□□ 1.42
RAB40C-212ENST00000569575 TARSL2A2RTX5 802 aaKnown RBP23.9■■□□□ 1.42
RAB40C-212ENST00000569575 CHURC1-FNTBB4DL54 471 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 ZNF185O15231 689 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 LIASO43766 372 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 EGFP01133 1207 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 CCNB1P14635 433 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 AP1B1Q10567 949 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 PTPRNQ16849 979 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 ZNF572Q7Z3I7 529 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-212ENST00000569575 TEX26Q8N6G2 289 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 PCDH20Q8N6Y1 951 aaKnown RBP23.9■■□□□ 1.42
RAB40C-212ENST00000569575 ATP11CQ8NB49 1132 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 HTR3CQ8WXA8 447 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 MRGPRX3Q96LB0 322 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 PSKH2Q96QS6 385 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 FBRSQ9HAH7 460 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 TRHDEQ9UKU6 1024 aa23.9■■□□□ 1.42
RAB40C-212ENST00000569575 TCRBV7S2A1N4TA0A589 114 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 FAM170BA6NMN3 283 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 J3KR12 359 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 SNAP91O60641 907 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 NTSR1P30989 418 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 CHRNA3P32297 505 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 MESP2Q0VG99 397 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 LBRQ14739 615 aaKnown RBP23.89■■□□□ 1.41
RAB40C-212ENST00000569575 EOGTQ5NDL2 527 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 NAIF1Q69YI7 327 aaPredicted RBP23.89■■□□□ 1.41
RAB40C-212ENST00000569575 DARS2Q6PI48 645 aaKnown RBP23.89■■□□□ 1.41
RAB40C-212ENST00000569575 C4orf22Q6V702 233 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 MAMSTRQ6ZN01 415 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 ZC3H18Q86VM9 953 aaKnown RBP23.89■■□□□ 1.41
RAB40C-212ENST00000569575 MNS1Q8NEH6 495 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 USP33Q8TEY7 942 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 PPP1R2P1Q96PQ5 205 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 LGMNQ99538 433 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 TMEM245Q9H330 911 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 MFSD1Q9H3U5 465 aa23.89■■□□□ 1.41
RAB40C-212ENST00000569575 NDRG2Q9UN36 371 aaKnown RBP23.89■■□□□ 1.41
RAB40C-212ENST00000569575 NYNRINQ9P2P1 1898 aaKnown RBP23.89■■□□□ 1.41
RAB40C-212ENST00000569575 NEBLO76041 1014 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 PEX11BO96011 259 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 SRCP12931 536 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 TARSP26639 723 aaKnown RBP23.88■■□□□ 1.41
RAB40C-212ENST00000569575 MAPK8P45983 427 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 CSNK1DP48730 415 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 FNTAP49354 379 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 ZNF234Q14588 700 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 UBXN2BQ14CS0 331 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms