RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SFSWAPQ12872 951 aaKnown RBP14.84□□□□□ -0.03
COMMD4-225ENST00000569245 MAMLD1Q13495 774 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 RAB6CQ53S08 254 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 PPP1R15BQ5SWA1 713 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 RWDD4Q6NW29 188 aaKnown RBP14.84□□□□□ -0.03
COMMD4-225ENST00000569245 STRADAQ7RTN6 431 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 BNIPLQ7Z465 357 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 MMAAQ8IVH4 418 aaKnown RBP14.84□□□□□ -0.03
COMMD4-225ENST00000569245 ZNF683Q8IZ20 524 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 OR52K2Q8NGK3 314 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 ZNF564Q8TBZ8 553 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-225ENST00000569245 SNX19Q92543 992 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 BTBD1Q9H0C5 482 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 RAB6CQ9H0N0 254 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 OSGEPQ9NPF4 335 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 TMEM9BQ9NQ34 198 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 CTTNBP2NLQ9P2B4 639 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 OR12D3Q9UGF7 316 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 EVLQ9UI08 416 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-225ENST00000569245 THADAQ6YHU6 1953 aa14.84□□□□□ -0.03
COMMD4-225ENST00000569245 KIF2AO00139 706 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-225ENST00000569245 BUB1O43683 1085 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 ACSL1P33121 698 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 PSMD8P48556 350 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 UAP1L1Q3KQV9 507 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 DAB2IPQ5VWQ8 1189 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 SCYL2Q6P3W7 929 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 SLC23A3Q6PIS1 610 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 SETD3Q86TU7 594 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-225ENST00000569245 STK40Q8N2I9 435 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 TPCN2Q8NHX9 752 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 ALG14Q96F25 216 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 MCEEQ96PE7 176 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 OMDQ99983 421 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 SPON2Q9BUD6 331 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 C2orf49Q9BVC5 232 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-225ENST00000569245 GTPBP2Q9BX10 602 aaKnown RBP14.83□□□□□ -0.04
COMMD4-225ENST00000569245 ZYG11BQ9C0D3 744 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 PABPC3Q9H361 631 aaKnown RBP14.83□□□□□ -0.04
COMMD4-225ENST00000569245 FSCN3Q9NQT6 498 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 FBXL12Q9NXK8 326 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 SUSD2Q9UGT4 822 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 SCML1Q9UN30 329 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.04
COMMD4-225ENST00000569245 RALGAPA1Q6GYQ0 2036 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 IGLV3-10A0A075B6K4 115 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 TMEM191CA6NGB0 347 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 FAM47DPA6NHR8 397 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 METTL12A8MUP2 240 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 MID1O15344 667 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 BNIP3LO60238 219 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 RNASEH2AO75792 299 aaKnown RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 SEMA4FO95754 770 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 IL1BP01584 269 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 SERPINF2P08697 491 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 VAV1P15498 845 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 ENGP17813 658 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 SLC8A1P32418 973 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 ZNF143P52747 638 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 NAP1L1P55209 391 aaKnown RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 HDAC4P56524 1084 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 RPL7AP62424 266 aaKnown RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 ETF1P62495 437 aaKnown RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 CST6Q15828 149 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 PEAR1Q5VY43 1037 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 SLFN11Q7Z7L1 901 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 DSG4Q86SJ6 1040 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 ATP11CQ8NB49 1132 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 TRIM58Q8NG06 486 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 CENPIQ92674 756 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 PTPRN2Q92932 1015 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 ALS2CR12Q96Q35 445 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 SGK2Q9HBY8 427 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 PPARGC1AQ9UBK2 798 aaKnown RBP14.82□□□□□ -0.04
COMMD4-225ENST00000569245 LCMT1Q9UIC8 334 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 OR51B4Q9Y5P0 310 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 CAPN6Q9Y6Q1 641 aa14.82□□□□□ -0.04
COMMD4-225ENST00000569245 A0A0D9SEW6 157 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 A0A1W2PP55 124 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 GRID2IPA4D2P6 1211 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 CBX4O00257 560 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 SNAP91O60641 907 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 FSBPO95073 299 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 GNG11P61952 73 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 ELAVL3Q14576 367 aaKnown RBP14.81□□□□□ -0.04
COMMD4-225ENST00000569245 DLG2Q15700 870 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 PPM1JQ5JR12 505 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 ZNF569Q5MCW4 686 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 C11orf63Q6NUN7 778 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 USP30Q70CQ3 517 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 HDDC3Q8N4P3 179 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 ZCCHC9Q8N567 271 aaKnown RBP14.81□□□□□ -0.04
COMMD4-225ENST00000569245 CCDC185Q8N715 623 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 LRRC57Q8N9N7 239 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 FNIP1Q8TF40 1166 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 UBE2Q2Q8WVN8 375 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 C16orf45Q96MC5 204 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-225ENST00000569245 FAM129BQ96TA1 746 aa14.81□□□□□ -0.04
COMMD4-225ENST00000569245 CNPY3Q9BT09 278 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms