RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SERPINH1P50454 418 aaKnown RBP8.01□□□□□ -1.13
CDH3-209ENST00000569080 CCR5P51681 352 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 CLCN6P51797 869 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 TAS2R38P59533 333 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 RPL7AP62424 266 aaKnown RBP8.01□□□□□ -1.13
CDH3-209ENST00000569080 OGDHQ02218 1023 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 DLG2Q15700 870 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 HLA-BQ31612 363 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 C6orf118Q5T5N4 469 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 PIP5KL1Q5T9C9 394 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 WDR59Q6PJI9 974 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 LINGO4Q6UY18 593 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 ZNF783Q6ZMS7 281 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 DBX2Q6ZNG2 339 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 NAXDQ8IW45 347 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 PIP4K2CQ8TBX8 421 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 FAM172AQ8WUF8 416 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 NAP1L5Q96NT1 182 aaPredicted RBP8.01□□□□□ -1.13
CDH3-209ENST00000569080 AGPAT1Q99943 283 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 C2orf49Q9BVC5 232 aaPredicted RBP8.01□□□□□ -1.13
CDH3-209ENST00000569080 ACE2Q9BYF1 805 aaPredicted RBP8.01□□□□□ -1.13
CDH3-209ENST00000569080 ZYG11BQ9C0D3 744 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 MUC3BQ9H195 1237 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 OSBPL2Q9H1P3 480 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 GAREM1Q9H706 876 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 ARHGAP20Q9P2F6 1191 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 PCOLCE2Q9UKZ9 415 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 ANKRD6Q9Y2G4 727 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 SNX11Q9Y5W9 270 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 CXorf51AA0A1B0GTR3 108 aa8□□□□□ -1.13
CDH3-209ENST00000569080 A0A1W2PQC6 194 aa8□□□□□ -1.13
CDH3-209ENST00000569080 FAM47DPA6NHR8 397 aa8□□□□□ -1.13
CDH3-209ENST00000569080 LRRC72A6NJI9 287 aa8□□□□□ -1.13
CDH3-209ENST00000569080 SIGLEC16A6NMB1 481 aa8□□□□□ -1.13
CDH3-209ENST00000569080 H0Y8X5 98 aa8□□□□□ -1.13
CDH3-209ENST00000569080 VILLO15195 856 aa8□□□□□ -1.13
CDH3-209ENST00000569080 SRGAP2O75044 1071 aa8□□□□□ -1.13
CDH3-209ENST00000569080 RTN2O75298 545 aa8□□□□□ -1.13
CDH3-209ENST00000569080 DKK1O94907 266 aa8□□□□□ -1.13
CDH3-209ENST00000569080 CER1O95813 267 aa8□□□□□ -1.13
CDH3-209ENST00000569080 KRT3P12035 628 aa8□□□□□ -1.13
CDH3-209ENST00000569080 FERP16591 822 aa8□□□□□ -1.13
CDH3-209ENST00000569080 RHOQP17081 205 aa8□□□□□ -1.13
CDH3-209ENST00000569080 SPINK2P20155 84 aa8□□□□□ -1.13
CDH3-209ENST00000569080 CDK11BP21127 795 aaKnown RBP8□□□□□ -1.13
CDH3-209ENST00000569080 GPD1P21695 349 aa8□□□□□ -1.13
CDH3-209ENST00000569080 OR1E1P30953 314 aa8□□□□□ -1.13
CDH3-209ENST00000569080 ACVRL1P37023 503 aa8□□□□□ -1.13
CDH3-209ENST00000569080 PBX1P40424 430 aa8□□□□□ -1.13
CDH3-209ENST00000569080 PRKCIP41743 596 aa8□□□□□ -1.13
CDH3-209ENST00000569080 MAPKAPK2P49137 400 aa8□□□□□ -1.13
CDH3-209ENST00000569080 ZNF143P52747 638 aaPredicted RBP8□□□□□ -1.13
CDH3-209ENST00000569080 RACK1P63244 317 aaKnown RBP8□□□□□ -1.13
CDH3-209ENST00000569080 KRT83P78385 493 aa8□□□□□ -1.13
CDH3-209ENST00000569080 SIM1P81133 766 aaPredicted RBP8□□□□□ -1.13
CDH3-209ENST00000569080 GNA12Q03113 381 aa8□□□□□ -1.13
CDH3-209ENST00000569080 CNTN1Q12860 1018 aa8□□□□□ -1.13
CDH3-209ENST00000569080 FOXC1Q12948 553 aa8□□□□□ -1.13
CDH3-209ENST00000569080 ZNF423Q2M1K9 1284 aa8□□□□□ -1.13
CDH3-209ENST00000569080 KLHL40Q2TBA0 621 aa8□□□□□ -1.13
CDH3-209ENST00000569080 POM121L1PQ3SYA9 428 aa8□□□□□ -1.13
CDH3-209ENST00000569080 DNAJC24Q6P3W2 148 aa8□□□□□ -1.13
CDH3-209ENST00000569080 IL27RAQ6UWB1 636 aa8□□□□□ -1.13
CDH3-209ENST00000569080 LRRC31Q6UY01 552 aa8□□□□□ -1.13
CDH3-209ENST00000569080 CYP4V2Q6ZWL3 525 aaPredicted RBP8□□□□□ -1.13
CDH3-209ENST00000569080 DSG4Q86SJ6 1040 aa8□□□□□ -1.13
CDH3-209ENST00000569080 GLRX5Q86SX6 157 aa8□□□□□ -1.13
CDH3-209ENST00000569080 TRIM69Q86WT6 500 aa8□□□□□ -1.13
CDH3-209ENST00000569080 DRC7Q8IY82 874 aa8□□□□□ -1.13
CDH3-209ENST00000569080 MCOLN2Q8IZK6 566 aa8□□□□□ -1.13
CDH3-209ENST00000569080 ATP11CQ8NB49 1132 aa8□□□□□ -1.13
CDH3-209ENST00000569080 CHST14Q8NCH0 376 aa8□□□□□ -1.13
CDH3-209ENST00000569080 OR14C36Q8NHC7 312 aa8□□□□□ -1.13
CDH3-209ENST00000569080 GANCQ8TET4 914 aa8□□□□□ -1.13
CDH3-209ENST00000569080 OR8D1Q8WZ84 308 aa8□□□□□ -1.13
CDH3-209ENST00000569080 ARRDC3Q96B67 414 aa8□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D31Q96DN5 1066 aa8□□□□□ -1.13
CDH3-209ENST00000569080 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
CDH3-209ENST00000569080 MCEEQ96PE7 176 aa8□□□□□ -1.13
CDH3-209ENST00000569080 PPP1R9BQ96SB3 815 aa8□□□□□ -1.13
CDH3-209ENST00000569080 OMDQ99983 421 aa8□□□□□ -1.13
CDH3-209ENST00000569080 SELENOOQ9BVL4 669 aa8□□□□□ -1.13
CDH3-209ENST00000569080 NAT10Q9H0A0 1025 aaKnown RBP8□□□□□ -1.13
CDH3-209ENST00000569080 KDM4CQ9H3R0 1056 aa8□□□□□ -1.13
CDH3-209ENST00000569080 SLC32A1Q9H598 525 aa8□□□□□ -1.13
CDH3-209ENST00000569080 NOL6Q9H6R4 1146 aaKnown RBP8□□□□□ -1.13
CDH3-209ENST00000569080 TM7SF3Q9NS93 570 aa8□□□□□ -1.13
CDH3-209ENST00000569080 TMEM248Q9NWD8 314 aa8□□□□□ -1.13
CDH3-209ENST00000569080 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
CDH3-209ENST00000569080 OR12D3Q9UGF7 316 aa8□□□□□ -1.13
CDH3-209ENST00000569080 NCKAP1Q9Y2A7 1128 aa8□□□□□ -1.13
CDH3-209ENST00000569080 BTBD3Q9Y2F9 522 aa8□□□□□ -1.13
CDH3-209ENST00000569080 PCDHGB2Q9Y5G2 931 aa8□□□□□ -1.13
CDH3-209ENST00000569080 ACTL7AQ9Y615 435 aa8□□□□□ -1.13
CDH3-209ENST00000569080 WASF2Q9Y6W5 498 aa8□□□□□ -1.13
CDH3-209ENST00000569080 SYCE3A1L190 88 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 C1QTNF3-AMACRE9PGA6 284 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 DDX3XO00571 662 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDH3-209ENST00000569080 ATMINO43313 823 aaPredicted RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 HYAL3O43820 417 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms