RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 BNIPLQ7Z465 357 aa18.65■□□□□ 0.58
PKD1-235ENST00000568591 PNPLA1Q8N8W4 532 aa18.65■□□□□ 0.58
PKD1-235ENST00000568591 NAT14Q8WUY8 206 aa18.65■□□□□ 0.58
PKD1-235ENST00000568591 MCMBPQ9BTE3 642 aa18.65■□□□□ 0.58
PKD1-235ENST00000568591 C1QTNF1Q9BXJ1 281 aa18.65■□□□□ 0.58
PKD1-235ENST00000568591 UBE2OQ9C0C9 1292 aaKnown RBP18.65■□□□□ 0.58
PKD1-235ENST00000568591 DMAP1Q9NPF5 467 aaPredicted RBP18.65■□□□□ 0.58
PKD1-235ENST00000568591 ADAM28Q9UKQ2 775 aa18.65■□□□□ 0.58
PKD1-235ENST00000568591 BRCA2P51587 3418 aa18.65■□□□□ 0.58
PKD1-235ENST00000568591 NOS2P35228 1153 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 ADRA1BP35368 520 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 FLOT2Q14254 428 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 ZNF423Q2M1K9 1284 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 SEL1L3Q68CR1 1132 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 CLEC20AQ6ZU45 233 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 OTOP3Q7RTS5 596 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 PTAR1Q7Z6K3 402 aaPredicted RBP18.64■□□□□ 0.57
PKD1-235ENST00000568591 LSMEM2Q8N112 164 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 ARRDC4Q8NCT1 418 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 SLC16A10Q8TF71 515 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 WNT8BQ93098 351 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 FERMT1Q9BQL6 677 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 DUSP16Q9BY84 665 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 VCX3BQ9H321 246 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 WDR6Q9NNW5 1121 aaKnown RBP18.64■□□□□ 0.57
PKD1-235ENST00000568591 PSMD13Q9UNM6 376 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 SHROOM3Q8TF72 1996 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 GPR32O75388 356 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 DDNO94850 711 aaPredicted RBP18.64■□□□□ 0.57
PKD1-235ENST00000568591 PRDX6P30041 224 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 TKTL1P51854 596 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 SLC41A1Q8IVJ1 513 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 MFSD6LQ8IWD5 586 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 DENND6AQ8IWF6 608 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 KYQ8NBH2 561 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 BHLHE22Q8NFJ8 381 aaPredicted RBP18.64■□□□□ 0.57
PKD1-235ENST00000568591 SGF29Q96ES7 293 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 SCYL1Q96KG9 808 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 NPAS2Q99743 824 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 APPL1Q9UKG1 709 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 DERAQ9Y315 318 aa18.64■□□□□ 0.57
PKD1-235ENST00000568591 A0A1B0GTW7 788 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 ASB14A6NK59 587 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 TMEM114B3SHH9 223 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 HDAC3O15379 428 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 MPOP05164 745 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 PIM1P11309 404 aaPredicted RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 NPR3P17342 541 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 RPL14P50914 215 aaKnown RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 TPI1P60174 286 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 PIGGQ5H8A4 983 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 ZNF280DQ6N043 979 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 SDCCAG8Q86SQ7 713 aaPredicted RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 ERO1BQ86YB8 467 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 CENPLQ8N0S6 344 aaPredicted RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 SNX31Q8N9S9 440 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 SPATA22Q8NHS9 363 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 EDEM1Q92611 657 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 ZNF419Q96HQ0 510 aaPredicted RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 CNBD2Q96M20 576 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 KLHL32Q96NJ5 620 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 FTHL17Q9BXU8 183 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 ULBP1Q9BZM6 244 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 LRRC4Q9HBW1 653 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 UBQLN1Q9UMX0 589 aaKnown RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 RGSL1A5PLK6 1076 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 ANKRD33BA6NCL7 494 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 SBF1O95248 1867 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 SLC35E2BP0CK96 405 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 MPP1Q00013 466 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 CTBP1Q13363 440 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 TTLL12Q14166 644 aaPredicted RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 USP10Q14694 798 aaKnown RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 WSCD1Q658N2 575 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 ARHGAP36Q6ZRI8 547 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 SIX6OS1Q8N1H7 587 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 FSTL5Q8N475 847 aaPredicted RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 GALNT4Q8N4A0 578 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 METTL25Q8N6Q8 603 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 HAPLN3Q96S86 360 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 NDNQ99608 321 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 DRC3Q9H069 523 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 RUVBL2Q9Y230 463 aaKnown RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 PIN4Q9Y237 131 aaKnown RBP18.63■□□□□ 0.57
PKD1-235ENST00000568591 FIS1Q9Y3D6 152 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 RAP2CQ9Y3L5 183 aa18.63■□□□□ 0.57
PKD1-235ENST00000568591 CRTAMO95727 393 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 JCHAINP01591 159 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 THRAP10827 490 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 ATP6V1B1P15313 513 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 LILRA4P59901 499 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 CDKL1Q00532 357 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 NSUN2Q08J23 767 aaKnown RBP eCLIP18.62■□□□□ 0.57
PKD1-235ENST00000568591 CYLC2Q14093 348 aaPredicted RBP18.62■□□□□ 0.57
PKD1-235ENST00000568591 C6orf52Q5T4I8 152 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 BNC2Q6ZN30 1099 aaPredicted RBP18.62■□□□□ 0.57
PKD1-235ENST00000568591 RPS27LQ71UM5 84 aaKnown RBP18.62■□□□□ 0.57
PKD1-235ENST00000568591 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
PKD1-235ENST00000568591 ZC3HC1Q86WB0 502 aaKnown RBP18.62■□□□□ 0.57
PKD1-235ENST00000568591 CEP97Q8IW35 865 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms