RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 CCP110O43303 1012 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 SMAD6O43541 496 aaKnown RBP30.07■■■□□ 2.4
RAB40C-211ENST00000568586 FSBPO95073 299 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 PMLP29590 882 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 GRIA4P48058 902 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 ADPRHP54922 357 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 AIF1P55008 147 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 TPM4P67936 248 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 MAMLD1Q13495 774 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 IL27RAQ6UWB1 636 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 SLFN11Q7Z7L1 901 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 ATP11CQ8NB49 1132 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 OR2I1PQ8NGU4 316 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 KDM4CQ9H3R0 1056 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 CHD8Q9HCK8 2581 aa30.07■■■□□ 2.4
RAB40C-211ENST00000568586 A0A1W2PPC4 97 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 ZNF883P0CG24 379 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 L1CAMP32004 1257 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 METAP1P53582 386 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 RETSATQ6NUM9 610 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 SNX19Q92543 992 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 NDFIP2Q9NV92 336 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 PARVAQ9NVD7 372 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 CHD5Q8TDI0 1954 aa30.06■■■□□ 2.4
RAB40C-211ENST00000568586 A0A1W2PQJ5 194 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 ZNF821O75541 412 aaPredicted RBP30.05■■■□□ 2.4
RAB40C-211ENST00000568586 GLDCP23378 1020 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 ETFBP38117 255 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 OGDHQ02218 1023 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 SKOR2Q2VWA4 1001 aaPredicted RBP30.05■■■□□ 2.4
RAB40C-211ENST00000568586 ZSCAN23Q3MJ62 389 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 DCUN1D2Q6PH85 259 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 TMIEQ8NEW7 156 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 PIP4K2CQ8TBX8 421 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 TBC1D31Q96DN5 1066 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 CEP44Q9C0F1 390 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 ATP13A1Q9HD20 1204 aa30.05■■■□□ 2.4
RAB40C-211ENST00000568586 C1QTNF3-AMACRE9PGA6 284 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 DDX3XO00571 662 aaKnown RBP eCLIP30.04■■■□□ 2.42e-7■■■■■ 28.9
RAB40C-211ENST00000568586 CSNK1EP49674 416 aaKnown RBP30.04■■■□□ 2.4
RAB40C-211ENST00000568586 SERPINH1P50454 418 aaKnown RBP30.04■■■□□ 2.4
RAB40C-211ENST00000568586 RACK1P63244 317 aaKnown RBP30.04■■■□□ 2.4
RAB40C-211ENST00000568586 ARF5P84085 180 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 KLHL30Q0D2K2 578 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 RWDD4Q6NW29 188 aaKnown RBP30.04■■■□□ 2.4
RAB40C-211ENST00000568586 LINGO4Q6UY18 593 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 DRC7Q8IY82 874 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 DEFB124Q8NES8 71 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 SYN2Q92777 582 aaPredicted RBP30.04■■■□□ 2.4
RAB40C-211ENST00000568586 CCDC114Q96M63 670 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 SPON2Q9BUD6 331 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 MAGEH1Q9H213 219 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 SLC32A1Q9H598 525 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 EBF2Q9HAK2 575 aa30.04■■■□□ 2.4
RAB40C-211ENST00000568586 FARP1Q9Y4F1 1045 aaPredicted RBP30.04■■■□□ 2.4
RAB40C-211ENST00000568586 A0A1B0GVT2 93 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 CBX4O00257 560 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 LATO43561 262 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 CD160O95971 181 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 CTSLP07711 333 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 CHRNA3P32297 505 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 UBASH3AP57075 661 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 SHC2P98077 582 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 TEAD4Q15561 434 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 AGBL4Q5VU57 503 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 C22orf39Q6P5X5 142 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP30.03■■■□□ 2.4
RAB40C-211ENST00000568586 OR14C36Q8NHC7 312 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 ARHGEF2Q92974 986 aaKnown RBP30.03■■■□□ 2.4
RAB40C-211ENST00000568586 FZD10Q9ULW2 581 aa30.03■■■□□ 2.4
RAB40C-211ENST00000568586 FAM47DPA6NHR8 397 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 PLRG1O43660 514 aaKnown RBP30.02■■■□□ 2.4
RAB40C-211ENST00000568586 CER1O95813 267 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 FTLP02792 175 aaPredicted RBP30.02■■■□□ 2.4
RAB40C-211ENST00000568586 KCNA4P22459 653 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 CNTN1Q12860 1018 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 HLA-BQ31612 363 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 EFHC2Q5JST6 749 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 HGSNATQ68CP4 663 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 DBX2Q6ZNG2 339 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 PLPP6Q8IY26 295 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 ISG20Q96AZ6 181 aaKnown RBP30.02■■■□□ 2.4
RAB40C-211ENST00000568586 IQCDQ96DY2 449 aa30.02■■■□□ 2.4
RAB40C-211ENST00000568586 TMEM191CA6NGB0 347 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 TMCO5BA8MYB1 307 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 RTN2O75298 545 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 ACVRL1P37023 503 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 HNRNPDQ14103 355 aaKnown RBP30.01■■■□□ 2.39
RAB40C-211ENST00000568586 KIF19Q2TAC6 998 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 TMC6Q7Z403 805 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 PYROXD2Q8N2H3 581 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 PCDH20Q8N6Y1 951 aaKnown RBP30.01■■■□□ 2.39
RAB40C-211ENST00000568586 FNIP1Q8TF40 1166 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 ISCUQ9H1K1 167 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 GAREM1Q9H706 876 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 ANKRD6Q9Y2G4 727 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 PCDHGB2Q9Y5G2 931 aa30.01■■■□□ 2.39
RAB40C-211ENST00000568586 BZW2Q9Y6E2 419 aaKnown RBP30.01■■■□□ 2.39
RAB40C-211ENST00000568586 CABIN1Q9Y6J0 2220 aa30■■■□□ 2.39
RAB40C-211ENST00000568586 WASH4PA8MWX3 477 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms