RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FEM1AQ9BSK4 669 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 POPDC2Q9HBU9 364 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 VPS28Q9UK41 221 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 A0A1W2PNU3 283 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 H3BM21 787 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 KPNA3O00505 521 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 CTSLP07711 333 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 NME1P15531 152 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 GPD2P43304 727 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 CENPCQ03188 943 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 EIF4EBP2Q13542 120 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 CDKN3Q16667 212 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 ZNF542PQ5EBM4 170 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 FBXL22Q6P050 247 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 GUSBP11Q6P575 273 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 KYAT3Q6YP21 454 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 RBM44Q6ZP01 1051 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 Q6ZSR6 202 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 EFL1Q7Z2Z2 1120 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 PTAR1Q7Z6K3 402 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 KAT5Q92993 513 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 RPRD1AQ96P16 312 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 MED15Q96RN5 788 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 CAAP1Q9H8G2 361 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 FAM204AQ9H8W3 233 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 GPR27Q9NS67 375 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 HS3ST2Q9Y278 367 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 ENTPD2Q9Y5L3 495 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 HEMK1Q9Y5R4 338 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 CSNK1G3Q9Y6M4 447 aa12.1□□□□□ -0.47
GTF3C1-209ENST00000568569 CPED1A4D0V7 1026 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 TCEA3O75764 348 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 PCDH8O95206 1070 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 CALCAP01258 141 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 CSF2P04141 144 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 PRNPP04156 253 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 SRCP12931 536 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 CCR1P32246 355 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 CHRNA3P32297 505 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 FMO5P49326 533 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 YWHAZP63104 245 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 PITX1P78337 314 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 CLN3Q13286 438 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 MTA1Q13330 715 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 PKP1Q13835 747 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 ZSCAN23Q3MJ62 389 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 TMEM259Q4ZIN3 620 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 SEL1L3Q68CR1 1132 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 OR6B2Q6IFH4 312 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 CLEC14AQ86T13 490 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 PARGQ86W56 976 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 ATP11CQ8NB49 1132 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 STK32AQ8WU08 396 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 ARRDC3Q96B67 414 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 PRR11Q96HE9 360 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 CCDC34Q96HJ3 373 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 PPP1R16AQ96I34 528 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 SPATA32Q96LK8 384 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC4A5Q9BY07 1137 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 HDAC8Q9BY41 377 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 THAP9Q9H5L6 903 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 DDIT4Q9NX09 232 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 ZFR2Q9UPR6 939 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 OR51B4Q9Y5P0 310 aa12.09□□□□□ -0.47
GTF3C1-209ENST00000568569 AHCTF1Q8WYP5 2266 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 SPTY2D1-AS1A0A0U1RR47 76 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 EME2A4GXA9 379 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 E5RJQ4 531 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 PMM2O15305 246 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 CLDN11O75508 207 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 TNFSF15O95150 251 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 ITGA2BP08514 1039 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 KRT10P13645 584 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 PRCPP42785 496 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 RABIFP47224 123 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 RPS21P63220 83 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 KRT83P78385 493 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 CDK17Q00537 523 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 GCNT1Q02742 428 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 CETN1Q12798 172 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 NFATC3Q12968 1075 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 AUHQ13825 339 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 FZD2Q14332 565 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 NR0B2Q15466 257 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 MEA1Q16626 185 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 ARL13BQ3SXY8 428 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms