RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 F9P00740 461 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 CALB1P05937 261 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 C1QTNF9P0C862 333 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 FAM228BP0C875 321 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 GOT1P17174 413 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 ADPRHP54922 357 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
TSC2-220ENST00000568238 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 SLC25A52Q3SY17 297 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 C5orf22Q49AR2 442 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 DSG4Q86SJ6 1040 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 OR52K2Q8NGK3 314 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 FRS2Q8WU20 508 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 ALG14Q96F25 216 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 TBCBQ99426 244 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 ORAI3Q9BRQ5 295 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 MUC3BQ9H195 1237 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 NEUROG2Q9H2A3 272 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 NHEJ1Q9H9Q4 299 aaPredicted RBP13.22□□□□□ -0.29
TSC2-220ENST00000568238 ANLNQ9NQW6 1124 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 IMPACTQ9P2X3 320 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 PCOLCE2Q9UKZ9 415 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 TBC1D30Q9Y2I9 924 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 OR51B4Q9Y5P0 310 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 SNX11Q9Y5W9 270 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 PKD1L2Q7Z442 2459 aa13.22□□□□□ -0.29
TSC2-220ENST00000568238 PTPRBP23467 1997 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 NBEAQ8NFP9 2946 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 A0A1W2PPC4 97 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 I6L893 689 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 FLRT2O43155 660 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 ATP9BO43861 1147 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 AKR1B10O60218 316 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 CBFA2T3O75081 653 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 RHOCP08134 193 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 FTH1P19P0C7X4 201 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 FLT3P36888 993 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 CTSKP43235 329 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 CCT8P50990 548 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 CCR5P51681 352 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 C21orf59P57076 290 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 RACK1P63244 317 aaKnown RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 GSE1Q14687 1217 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 ACCSLQ4AC99 568 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 ALFQ53S48 1182 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 ACBD5Q5T8D3 534 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 PPP1R2P3Q6NXS1 205 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 DNAJC24Q6P3W2 148 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 LRRC31Q6UY01 552 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 ZNF683Q8IZ20 524 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 OR14C36Q8NHC7 312 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 GATA6Q92908 595 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 CCDC42Q96M95 316 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 SLC6A18Q96N87 628 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 PANX2Q96RD6 677 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 C2orf49Q9BVC5 232 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 ACE2Q9BYF1 805 aaPredicted RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 METTL5Q9NRN9 209 aaKnown RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 SPTLC3Q9NUV7 552 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 KLK13Q9UKR3 277 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
TSC2-220ENST00000568238 SNX10Q9Y5X0 201 aa13.21□□□□□ -0.29
TSC2-220ENST00000568238 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 SSU72P8A0A1W2PR75 194 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 TMEM8BA6NDV4 472 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 C1QTNF3-AMACRE9PGA6 284 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 ALOX15BO15296 676 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 RTN2O75298 545 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 CNTN5O94779 1100 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 GZMAP12544 262 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 RRM1P23921 792 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 DRD3P35462 400 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 KRT83P78385 493 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 DLG2Q15700 870 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 CCDC122Q5T0U0 273 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 C6orf118Q5T5N4 469 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 FAM46CQ5VWP2 391 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 TRNP1Q6NT89 227 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 Q6ZVU0 165 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 RAB44Q7Z6P3 723 aaPredicted RBP13.2□□□□□ -0.3
TSC2-220ENST00000568238 GLRX5Q86SX6 157 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 SETD3Q86TU7 594 aaPredicted RBP13.2□□□□□ -0.3
TSC2-220ENST00000568238 CHCHD4Q8N4Q1 142 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 SH2D3CQ8N5H7 860 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 SKA1Q96BD8 255 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 ZNF653Q96CK0 615 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 CFAP57Q96MR6 1250 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 TMEM59LQ9UK28 342 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 APOBEC2Q9Y235 224 aaKnown RBP13.2□□□□□ -0.3
TSC2-220ENST00000568238 HS3ST2Q9Y278 367 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 MSRB2Q9Y3D2 182 aa13.2□□□□□ -0.3
TSC2-220ENST00000568238 CHD5Q8TDI0 1954 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms