RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TNKS2Q9H2K2 1166 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 ETNK2Q9NVF9 386 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 WSB2Q9NYS7 404 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 USP36Q9P275 1121 aaKnown RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 NCDNQ9UBB6 729 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 HS3ST2Q9Y278 367 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 MFHAS1Q9Y4C4 1052 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 HYOU1Q9Y4L1 999 aa13.29□□□□□ -0.28
CNOT1-213ENST00000568158 ZFHX2Q9C0A1 2572 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-213ENST00000568158 NUMA1Q14980 2115 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 GON4LQ3T8J9 2241 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 H3BRJ5 948 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 MID1O15344 667 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 BUB1O43683 1085 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 RNASEH1O60930 286 aaKnown RBP13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ZNF821O75541 412 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-213ENST00000568158 DNTTP04053 509 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 IL4RP24394 825 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 CD6P30203 668 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 SLC8A1P32418 973 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ETFBP38117 255 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ARL4AP40617 200 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ARHGAP25P42331 645 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 DHPSP49366 369 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-213ENST00000568158 PAPOLAP51003 745 aaKnown RBP13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ARSEP51690 589 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 SERINC3Q13530 473 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 DPYSQ14117 519 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 TCEAL1Q15170 157 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ELF2Q15723 593 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 CCDC6Q16204 474 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 PMS2CLQ68D20 193 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ARMCX6Q7L4S7 300 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 KCTD6Q8NC69 237 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 CHST14Q8NCH0 376 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 ACRBPQ8NEB7 543 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 RUBCNQ92622 972 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 TOE1Q96GM8 510 aaKnown RBP13.28□□□□□ -0.28
CNOT1-213ENST00000568158 CSPG4P5Q96PW8 444 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 HINFPQ9BQA5 517 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 LRRC19Q9H756 370 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 FBRSQ9HAH7 460 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 KLHL11Q9NVR0 708 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 SARDHQ9UL12 918 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 HPCAL4Q9UM19 191 aa13.28□□□□□ -0.28
CNOT1-213ENST00000568158 FCF1Q9Y324 198 aaKnown RBP13.28□□□□□ -0.28
CNOT1-213ENST00000568158 J3KR12 359 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 RNF103O00237 685 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 PLK4O00444 970 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 MCF2LO15068 1137 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 NDUFS2O75306 463 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 IL1BP01584 269 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 RETP07949 1114 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 C7P10643 843 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 TNNT1P13805 278 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 ACSL1P33121 698 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 PTGER3P43115 390 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 PSMD8P48556 350 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 SERPINH1P50454 418 aaKnown RBP13.27□□□□□ -0.29
CNOT1-213ENST00000568158 DNA2P51530 1060 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 NDST2P52849 883 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 METAP1P53582 386 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 RPL6Q02878 288 aaKnown RBP13.27□□□□□ -0.29
CNOT1-213ENST00000568158 SPEM2Q0P670 501 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 KRT81Q14533 505 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 CST6Q15828 149 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 SLC36A4Q6YBV0 504 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 LPCAT2Q7L5N7 544 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 C11orf74Q86VG3 221 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 SLC41A1Q8IVJ1 513 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 ARHGAP12Q8IWW6 846 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 OR2A12Q8NGT7 310 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 GANCQ8TET4 914 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 OR8D1Q8WZ84 308 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 TSC1Q92574 1164 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 GPR174Q9BXC1 333 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 NEUROG2Q9H2A3 272 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 FBXL12Q9NXK8 326 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 SALL4Q9UJQ4 1053 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 PLXND1Q9Y4D7 1925 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 GPR179Q6PRD1 2367 aa13.27□□□□□ -0.29
CNOT1-213ENST00000568158 A0A0U1RQJ8 604 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 A0A1W2PP55 124 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 BUB1BO60566 1050 aaPredicted RBP13.26□□□□□ -0.29
CNOT1-213ENST00000568158 EPN2O95208 641 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 CTSLP07711 333 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 DMDP11532 3685 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 COMTP21964 271 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 TGM1P22735 817 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 MAOBP27338 520 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 OXTRP30559 389 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 MAN1A1P33908 653 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 ZNF135P52742 658 aaPredicted RBP13.26□□□□□ -0.29
CNOT1-213ENST00000568158 CREB5Q02930 508 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 ZBTB16Q05516 673 aa13.26□□□□□ -0.29
CNOT1-213ENST00000568158 DPYSL3Q14195 570 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms