RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 ALDH1A2O94788 518 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 ASLP04424 464 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 RARAP10276 462 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 PABPC1P11940 636 aaKnown RBP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 GABRG2P18507 467 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 POLR2EP19388 210 aaKnown RBP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 IL1R2P27930 398 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 EPHB2P29323 1055 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 HLA-FP30511 346 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 ARL4AP40617 200 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 SGSHP51688 502 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 NAP1L1P55209 391 aaKnown RBP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 YBEYP58557 167 aaPredicted RBP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 IRX4P78413 519 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 SLC25A11Q02978 314 aaKnown RBP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 SLC20A2Q08357 652 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 MAP7D1Q3KQU3 841 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 ARSIQ5FYB1 569 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 ZNF569Q5MCW4 686 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 FAM72AQ5TYM5 149 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 SDE2Q6IQ49 451 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 FAM72DQ6L9T8 149 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 KIAA1211LQ6NV74 962 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 CYP2U1Q7Z449 544 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 NLRP14Q86W24 1093 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 FAM72BQ86X60 149 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 PIGKQ92643 395 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 MYEOVQ96EZ4 313 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 FEM1AQ9BSK4 669 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 SNRNP25Q9BV90 132 aaKnown RBP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 SLC6A17Q9H1V8 727 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 DHX35Q9H5Z1 703 aaKnown RBP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 CD248Q9HCU0 757 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 CD93Q9NPY3 652 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 TMPRSS4Q9NRS4 437 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 TMEM74BQ9NUR3 256 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 BCCIPQ9P287 314 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC01228-201ENST00000567966 GGA2Q9UJY4 613 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 RAD54BQ9Y620 910 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 DUSP10Q9Y6W6 482 aa11.33□□□□□ -0.6
LINC01228-201ENST00000567966 C4orf47A7E2U8 309 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 DAPK3O43293 454 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 PSTPIP1O43586 416 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 SPOPO43791 374 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 DLDP09622 509 aaKnown RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 HOXB2P14652 356 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 COMTP21964 271 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 OR1E1P30953 314 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 NTSR1P30989 418 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 PTGER3P43115 390 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 SSR1P43307 286 aaKnown RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 ARSEP51690 589 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 NDST2P52849 883 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 TPI1P60174 286 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 CXorf57Q6NSI4 855 aaKnown RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 DAAM2Q86T65 1068 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 ADIPOR2Q86V24 386 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 LRRC49Q8IUZ0 686 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 UMODL1-AS1Q8N2C9 162 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 RTL3Q8N8U3 475 aaKnown RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 KCTD6Q8NC69 237 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 WDR24Q96S15 920 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 C2orf49Q9BVC5 232 aaPredicted RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 MAGEH1Q9H213 219 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 ABCB8Q9NUT2 735 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 SALL4Q9UJQ4 1053 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 CLEC4EQ9ULY5 219 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 OR51B4Q9Y5P0 310 aa11.32□□□□□ -0.6
LINC01228-201ENST00000567966 ATXN2Q99700 1313 aaKnown RBP11.32□□□□□ -0.6
LINC01228-201ENST00000567966 ADAMTS9Q9P2N4 1935 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 EFCAB8A8MWE9 144 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CDX4O14627 284 aaPredicted RBP11.31□□□□□ -0.6
LINC01228-201ENST00000567966 GIPC1O14908 333 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 KHNYNO15037 678 aaKnown RBP11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CREB3O43889 395 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CNTN5O94779 1100 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 SRPRAP08240 638 aaKnown RBP11.31□□□□□ -0.6
LINC01228-201ENST00000567966 NDUFV2P19404 249 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 NNMTP40261 264 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 ECT2LQ008S8 904 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 LMAN2Q12907 356 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 ENPP2Q13822 863 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 GEN1Q17RS7 908 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 PLEKHG6Q3KR16 790 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 PARP15Q460N3 678 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 ALFQ53S48 1182 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 ODF2Q5BJF6 829 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 FSCBQ5H9T9 825 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 KCNT1Q5JUK3 1230 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms