RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MZF1P28698 734 aaPredicted RBP13.76□□□□□ -0.21
CLK3-218ENST00000566926 CD6P30203 668 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 OR1E1P30953 314 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 HDAC4P56524 1084 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
CLK3-218ENST00000566926 CKAP4Q07065 602 aaKnown RBP13.76□□□□□ -0.21
CLK3-218ENST00000566926 TTC31Q49AM3 519 aaPredicted RBP13.76□□□□□ -0.21
CLK3-218ENST00000566926 ALFQ53S48 1182 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 EFHC2Q5JST6 749 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 PLA2G2CQ5R387 149 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 LYSMD4Q5XG99 296 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 ZNF776Q68DI1 518 aaPredicted RBP13.76□□□□□ -0.21
CLK3-218ENST00000566926 SCYL2Q6P3W7 929 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 RABEPKQ7Z6M1 372 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 NT5DC3Q86UY8 548 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 TMEFF1Q8IYR6 380 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 ZNF683Q8IZ20 524 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 ZNF366Q8N895 744 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 MYO19Q96H55 970 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 MRGPRX3Q96LB0 322 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 SLC6A17Q9H1V8 727 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 MRFAP1Q9Y605 127 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 ALG6Q9Y672 507 aa13.76□□□□□ -0.21
CLK3-218ENST00000566926 ILVBLA1L0T0 632 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 FANCGO15287 622 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 SPOPO43791 374 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 RNF8O76064 485 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 CNTN5O94779 1100 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 FTCDO95954 541 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 IGLV3-19P01714 112 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 ATP1A1P05023 1023 aaKnown RBP13.75□□□□□ -0.21
CLK3-218ENST00000566926 HOXD12P35452 270 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 ETFBP38117 255 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 CTSOP43234 321 aaPredicted RBP13.75□□□□□ -0.21
CLK3-218ENST00000566926 ID4P47928 161 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 TPMTP51580 245 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 ZNF33AQ06730 810 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 SCAPQ12770 1279 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 MESDQ14696 234 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 AASDHQ4L235 1098 aaPredicted RBP13.75□□□□□ -0.21
CLK3-218ENST00000566926 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 SH3PXD2AQ5TCZ1 1133 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 SYT12Q8IV01 421 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 FRMD1Q8N878 549 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 PIGKQ92643 395 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 ALG14Q96F25 216 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 HES6Q96HZ4 224 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 PBKQ96KB5 322 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 RPL10LQ96L21 214 aaKnown RBP13.75□□□□□ -0.21
CLK3-218ENST00000566926 TLR10Q9BXR5 811 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 RSPH9Q9H1X1 276 aaPredicted RBP13.75□□□□□ -0.21
CLK3-218ENST00000566926 TMPRSS4Q9NRS4 437 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 WSB2Q9NYS7 404 aaPredicted RBP13.75□□□□□ -0.21
CLK3-218ENST00000566926 MPP6Q9NZW5 540 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 SLCO3A1Q9UIG8 710 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 NCKAP1Q9Y2A7 1128 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 OR51B4Q9Y5P0 310 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 SNX10Q9Y5X0 201 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 CACNA1EQ15878 2313 aa13.75□□□□□ -0.21
CLK3-218ENST00000566926 TTC34A8MYJ7 566 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 ENC1O14682 589 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 KHNYNO15037 678 aaKnown RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 PSTPIP1O43586 416 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 SIN3BO75182 1162 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 RHOQP17081 205 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 PSMA2P25787 234 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 CTNNA2P26232 953 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 L1CAMP32004 1257 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 CTNNA1P35221 906 aaKnown RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 MAPKAPK2P49137 400 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 IRAK1P51617 712 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 RPS14P62263 151 aaKnown RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 ACCSLQ4AC99 568 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 LRRC38Q5VT99 294 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 RWDD4Q6NW29 188 aaKnown RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 TFAP2DQ7Z6R9 452 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 DSG4Q86SJ6 1040 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 DCAF4L2Q8NA75 395 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 CADM4Q8NFZ8 388 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 CEP76Q8TAP6 659 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 NETO1Q8TDF5 533 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 TBC1D31Q96DN5 1066 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 TOE1Q96GM8 510 aaKnown RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 ZNF419Q96HQ0 510 aaPredicted RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 CCDC114Q96M63 670 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 OSBPL9Q96SU4 736 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 PCED1AQ9H1Q7 454 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 CARD9Q9H257 536 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 DONSONQ9NYP3 566 aa13.74□□□□□ -0.21
CLK3-218ENST00000566926 CDV3Q9UKY7 258 aaKnown RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
CLK3-218ENST00000566926 CXorf51AA0A1B0GTR3 108 aa13.73□□□□□ -0.21
CLK3-218ENST00000566926 ATP9BO43861 1147 aa13.73□□□□□ -0.21
CLK3-218ENST00000566926 ADH1BP00325 375 aa13.73□□□□□ -0.21
CLK3-218ENST00000566926 COMTP21964 271 aa13.73□□□□□ -0.21
CLK3-218ENST00000566926 HTR7P34969 479 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms