RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 KCNMB4Q86W47 210 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 TNS4Q8IZW8 715 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 OR6B3Q8NGW1 331 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 VPS39Q96JC1 886 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 NPY6RQ99463 290 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 C1QTNF1Q9BXJ1 281 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 GBA3Q9H227 469 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 MAN1C1Q9NR34 630 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 ABT1Q9ULW3 272 aaKnown RBP21.96■■□□□ 1.11
SPSB3-208ENST00000566339 GNEQ9Y223 722 aaKnown RBP21.96■■□□□ 1.11
SPSB3-208ENST00000566339 MCM3APO60318 1980 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 DNAJC25-GNG10A0A024R161 153 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 ZMPSTE24O75844 475 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 C8BP07358 591 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 INSRRP14616 1297 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 XRCC1P18887 633 aaPredicted RBP21.95■■□□□ 1.1
SPSB3-208ENST00000566339 CYP2B6P20813 491 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 PTPN3P26045 913 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 MYBPC1Q00872 1141 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 ZNF33AQ06730 810 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 SCAPQ12770 1279 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 SLC12A1Q13621 1099 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 TTLL12Q14166 644 aaPredicted RBP21.95■■□□□ 1.1
SPSB3-208ENST00000566339 DLK2Q6UY11 383 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 TMEM102Q8N9M5 508 aaPredicted RBP21.95■■□□□ 1.1
SPSB3-208ENST00000566339 CCNYQ8ND76 341 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 OR52K1Q8NGK4 314 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 NMD3Q96D46 503 aaKnown RBP21.95■■□□□ 1.1
SPSB3-208ENST00000566339 ASB9Q96DX5 294 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 SNX27Q96L92 541 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 CATSPER2Q96P56 530 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 SARDHQ9UL12 918 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 EVPLQ92817 2033 aa21.95■■□□□ 1.1
SPSB3-208ENST00000566339 PGM3O95394 542 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 PIGNO95427 931 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 PNPLA4P41247 253 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 GRIA4P48058 902 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 MRPS22P82650 360 aaKnown RBP21.94■■□□□ 1.1
SPSB3-208ENST00000566339 LAMC2Q13753 1193 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 CEACAM7Q14002 265 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 CST9Q5W186 159 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 LINC00523Q86TU6 105 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 CCDC117Q8IWD4 279 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-208ENST00000566339 DEFB106AQ8N104 65 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 KCTD13Q8WZ19 329 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 RCN3Q96D15 328 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 ZNF668Q96K58 619 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-208ENST00000566339 OSBPL11Q9BXB4 747 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 OXCT2Q9BYC2 517 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-208ENST00000566339 GDAP2Q9NXN4 497 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 MFHAS1Q9Y4C4 1052 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 NME7Q9Y5B8 376 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 EEF2KO00418 725 aaKnown RBP21.94■■□□□ 1.1
SPSB3-208ENST00000566339 OR6B1O95007 311 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 CD4P01730 458 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 LCP1P13796 627 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 MPSTP25325 297 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 TUBA4AP68366 448 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 PPIL2Q13356 520 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 BSPRYQ5W0U4 402 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 EEPD1Q7L9B9 569 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 LIMS2Q7Z4I7 341 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 TMEM151AQ8N4L1 468 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 BHLHE22Q8NFJ8 381 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-208ENST00000566339 CLEC4CQ8WTT0 213 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 HDAC11Q96DB2 347 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 ZNF597Q96LX8 424 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 ZNF560Q96MR9 790 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 SLC2A13Q96QE2 648 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 SENP6Q9GZR1 1112 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-208ENST00000566339 ZNF408Q9H9D4 720 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 AKT3Q9Y243 479 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 TRPM7Q96QT4 1865 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 CITO14578 2027 aa21.94■■□□□ 1.1
SPSB3-208ENST00000566339 TARM1B6A8C7 271 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 TXNP10599 105 aaKnown RBP21.93■■□□□ 1.1
SPSB3-208ENST00000566339 DNAJB13P59910 316 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 CDC42EP1Q00587 391 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 STX5Q13190 355 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 PEX6Q13608 980 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 TBC1D25Q3MII6 688 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 ARL13AQ5H913 290 aaPredicted RBP21.93■■□□□ 1.1
SPSB3-208ENST00000566339 FAM131BQ86XD5 332 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 PYROXD2Q8N2H3 581 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 TMEM130Q8N3G9 435 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 AFAP1L2Q8N4X5 818 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 METTL25Q8N6Q8 603 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 NLRP7Q8WX94 980 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 TNIP3Q96KP6 325 aa21.93■■□□□ 1.1
SPSB3-208ENST00000566339 UHRF1Q96T88 793 aaPredicted RBP21.93■■□□□ 1.1
SPSB3-208ENST00000566339 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.93■■□□□ 1.1
SPSB3-208ENST00000566339 UBQLN1Q9UMX0 589 aaKnown RBP21.93■■□□□ 1.1
SPSB3-208ENST00000566339 A0A0G2JLL6 359 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 CELF2O95319 508 aaKnown RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 ZNF23P17027 643 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 PSMC3P17980 439 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 NAPEPLDQ6IQ20 393 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 PRRT2Q7Z6L0 340 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-208ENST00000566339 CNTN4Q8IWV2 1026 aa21.92■■□□□ 1.1
SPSB3-208ENST00000566339 DNAAF3Q8N9W5 541 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms