RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 MATN4O95460 622 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 PRG2P13727 222 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 PRLRP16471 622 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 MSX1P28360 303 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 HOXA13P31271 388 aaPredicted RBP10.94□□□□□ -0.66
UBFD1-205ENST00000566136 PGM1P36871 562 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 CASP9P55211 416 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 CCDC122Q5T0U0 273 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 ATG14Q6ZNE5 492 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 LRRC55Q6ZSA7 311 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 TMEM179Q6ZVK1 233 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 LURAP1LQ8IV03 231 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 DCBLD1Q8N8Z6 715 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 MSLNLQ96KJ4 702 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 MRGPRX1Q96LB2 322 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 TEPSINQ96N21 525 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 ERGIC2Q96RQ1 377 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 NUP58Q9BVL2 599 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 FAM53CQ9NYF3 392 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 RGL1Q9NZL6 768 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 TADA2AO75478 443 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 HMGCRP04035 888 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 CD3EP07766 207 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 PLA2G4BP0C869 781 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 BMP1P13497 986 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 SREBF2Q12772 1141 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 TNFAIP1Q13829 316 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 NCAPH2Q6IBW4 605 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 GPBP1Q86WP2 473 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 ZBTB9Q96C00 473 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 BCL7BQ9BQE9 202 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 PHF7Q9BWX1 381 aaPredicted RBP10.94□□□□□ -0.66
UBFD1-205ENST00000566136 CDIP1Q9H305 208 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 TLR8Q9NR97 1041 aaKnown RBP10.94□□□□□ -0.66
UBFD1-205ENST00000566136 A0A1W2PRG0 241 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 GJB1P08034 283 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 AFF1P51825 1210 aaKnown RBP10.93□□□□□ -0.66
UBFD1-205ENST00000566136 EPS8Q12929 822 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 NR0B2Q15466 257 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 MAN2A1Q16706 1144 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 FAM187BQ17R55 369 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 Q6ZVU0 165 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 BBS12Q6ZW61 710 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 FBXO11Q86XK2 927 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 MYOCDQ8IZQ8 938 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 FAM181AQ8N9Y4 354 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 SPERTQ8NA61 448 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CDK5RAP1Q96SZ6 601 aaKnown RBP10.93□□□□□ -0.66
UBFD1-205ENST00000566136 AMNQ9BXJ7 453 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 KCNMB3Q9NPA1 279 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 HCFC1R1Q9NWW0 138 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 MRPL15Q9P015 296 aaKnown RBP10.93□□□□□ -0.66
UBFD1-205ENST00000566136 DUSP10Q9Y6W6 482 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CTAGE15A4D2H0 777 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 IFNL4K9M1U5 179 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 SIAH2O43255 324 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 LRRN2O75325 713 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 MMP2P08253 660 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 RHOXF2BP0C7M4 288 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CTAGE8P0CG41 777 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 PEPDP12955 493 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 NFKBIAP25963 317 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CYLC1P35663 651 aaPredicted RBP10.93□□□□□ -0.66
UBFD1-205ENST00000566136 SLC20A2Q08357 652 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 MALLQ13021 153 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 KCTD21Q4G0X4 260 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CYP4A22Q5TCH4 519 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 ADGRD1Q6QNK2 874 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CRTC3Q6UUV7 619 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 SLC30A10Q6XR72 485 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 TMC3Q7Z5M5 1100 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CTAGE6Q86UF2 777 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CTAGE4Q8IX94 777 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CEP112Q8N8E3 955 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 FAM216AQ8WUB2 273 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 INTS14Q96SY0 518 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 TSG101Q99816 390 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 RHOXF2Q9BQY4 288 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 MRIQ9BWK5 157 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 HAUS4Q9H6D7 363 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 POLD4Q9HCU8 107 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 INTS6Q9UL03 887 aaKnown RBP10.93□□□□□ -0.66
UBFD1-205ENST00000566136 GPC6Q9Y625 555 aaPredicted RBP10.93□□□□□ -0.66
UBFD1-205ENST00000566136 KDM3AQ9Y4C1 1321 aa10.93□□□□□ -0.66
UBFD1-205ENST00000566136 CCDC78A2IDD5 438 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 GPR25O00155 361 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ZNF254O75437 659 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ATP1A1P05023 1023 aaKnown RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 BMP3P12645 472 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 EIF2AK2P19525 551 aaKnown RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 TPP2P29144 1249 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 SOX18P35713 384 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ACAA2P42765 397 aaKnown RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 USP11P51784 963 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 HK3P52790 923 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 LRRC63Q05C16 580 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 SCAPQ12770 1279 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 MAPKAPK3Q16644 382 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms