RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 E2F5Q15329 346 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 PTPRNQ16849 979 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 FUT11Q495W5 492 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 MBLAC2Q68D91 279 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 AADACL2Q6P093 401 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 BMP8AQ7Z5Y6 402 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 TP53INP2Q8IXH6 220 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 MREGQ8N565 214 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 SPATA4Q8NEY3 305 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 OR7D4Q8NG98 312 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 FATE1Q969F0 183 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 PBKQ96KB5 322 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 TSGA13Q96PP4 275 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-206ENST00000565990 FAM107BQ9H098 131 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 VPS18Q9P253 973 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 THAP10Q9P2Z0 257 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-206ENST00000565990 TTC7AQ9ULT0 858 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-206ENST00000565990 SHROOM3Q8TF72 1996 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 TTC28Q96AY4 2481 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ANTXRLA6NF34 631 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 KCNK3O14649 394 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 APOL1O14791 398 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 NPC1O15118 1278 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 NCAM2O15394 837 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 TJP3O95049 919 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ASLP04424 464 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ATP5BP06576 529 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 SRPRAP08240 638 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 DLDP09622 509 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 POLR2EP19388 210 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 TGM2P21980 687 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 SERPINB6P35237 376 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 RPS9P46781 194 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 MRPS21P82921 87 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ECT2LQ008S8 904 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 GBE1Q04446 702 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ZNF33AQ06730 810 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ZNF211Q13398 564 aaPredicted RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 EMC10Q5UCC4 262 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 MAMSTRQ6ZN01 415 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 BZW1Q7L1Q6 419 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 RFX6Q8HWS3 928 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 RASGEF1CQ8N431 466 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 DCAF4L2Q8NA75 395 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 MYO19Q96H55 970 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 CELF6Q96J87 481 aaKnown RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 MRGPRX3Q96LB0 322 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 C2orf49Q9BVC5 232 aaPredicted RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 HEMGNQ9BXL5 484 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 MUC3BQ9H195 1237 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 TMEM245Q9H330 911 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 LMAN1LQ9HAT1 526 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 DTLQ9NZJ0 730 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 ERVW-1Q9UQF0 538 aa12.89□□□□□ -0.35
SF3B3-206ENST00000565990 MUC22E2RYF6 1773 aaPredicted RBP12.89□□□□□ -0.35
SF3B3-206ENST00000565990 TMEM221A6NGB7 291 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 ARHGAP42A6NI28 874 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 SRRM3A6NNA2 597 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-206ENST00000565990 CHURC1-FNTBB4DL54 471 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 APOC4-APOC2K7ER74 178 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 M0R296 226 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 MAFKO60675 156 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 SHOX2O60902 331 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-206ENST00000565990 PEX11BO96011 259 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 APOC2P02655 101 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 C7P10643 843 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 CCNCP24863 283 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 TARSP26639 723 aaKnown RBP12.88□□□□□ -0.35
SF3B3-206ENST00000565990 LMAN1P49257 510 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 CLCN5P51795 746 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 ARF5P84085 180 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 LLGL1Q15334 1064 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 HSF5Q4G112 596 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-206ENST00000565990 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-206ENST00000565990 KAZNQ674X7 775 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 IL31Q6EBC2 164 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 RETSATQ6NUM9 610 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 SLC13A5Q86YT5 568 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-206ENST00000565990 IFT20Q8IY31 132 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 PJA1Q8NG27 643 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 USP33Q8TEY7 942 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 UCMAQ8WVF2 138 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 SORCS1Q8WY21 1168 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 HMCESQ96FZ2 354 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 OLFM3Q96PB7 478 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 SH3GL2Q99962 352 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 SPON2Q9BUD6 331 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 FOXQ1Q9C009 403 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 EPHX3Q9H6B9 360 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 PDFQ9HBH1 243 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 DLGAP2Q9P1A6 1054 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 VPS51Q9UID3 782 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms