RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 GUCY2DQ02846 1103 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 GNA12Q03113 381 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 TRIP13Q15645 432 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 FYB2Q5VWT5 728 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 TANGO2Q6ICL3 276 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 CXorf57Q6NSI4 855 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 ARHGAP36Q6ZRI8 547 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 TMEM25Q86YD3 366 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 LRRC49Q8IUZ0 686 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 MFN1Q8IWA4 741 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 CCDC13Q8IYE1 715 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 GPR161Q8N6U8 529 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 CCHCR1Q8TD31 782 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 HTR3CQ8WXA8 447 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 IRF7Q92985 503 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 P2RY11Q96G91 374 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 ERP44Q9BS26 406 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 MAGEH1Q9H213 219 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 SEMA4AQ9H3S1 761 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 PCDH9Q9HC56 1237 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 THG1LQ9NWX6 298 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 PLK2Q9NYY3 685 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 SEPT10Q9P0V9 454 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 IGSF9Q9P2J2 1179 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 ASIC3Q9UHC3 531 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 DMGDHQ9UI17 866 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 IPO11Q9UI26 975 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 TBC1D30Q9Y2I9 924 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 UTP11Q9Y3A2 253 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 WDFY3Q8IZQ1 3526 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 ZFYVE26Q68DK2 2539 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 NUP210Q8TEM1 1887 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-205ENST00000564899 DCDC2BA2VCK2 349 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ZSCAN5CA6NGD5 496 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-205ENST00000564899 NEDD8-MDP1E9PL57 170 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 RNF103O00237 685 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 MTSS1O43312 755 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 NFATC1O95644 943 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ADH1CP00326 375 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 PENKP01210 267 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ZSCAN5DPP0CG00 497 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ETS1P14921 441 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ACTN2P35609 894 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ACVRL1P37023 503 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ETFBP38117 255 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 VPS41P49754 854 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 TERF1P54274 439 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ZNF33AQ06730 810 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 HTR4Q13639 388 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 PDGFRLQ15198 375 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ANO4Q32M45 955 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 EML3Q32P44 896 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 LY6G5CQ5SRR4 150 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 RNF219Q5W0B1 726 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-205ENST00000564899 RNF43Q68DV7 783 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 TRIM68Q6AZZ1 485 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 IL31Q6EBC2 164 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 TIGD7Q6NT04 549 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-205ENST00000564899 VITQ6UXI7 678 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ZNF783Q6ZMS7 281 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 PRUNE1Q86TP1 453 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 YAF2Q8IY57 180 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 OR7D4Q8NG98 312 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 OR52K2Q8NGK3 314 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ELSPBP1Q96BH3 223 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 RTP4Q96DX8 246 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 TSGA13Q96PP4 275 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 SPON2Q9BUD6 331 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 BBS2Q9BXC9 721 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 TRIM31Q9BZY9 425 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 DPH5Q9H2P9 285 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 SP110Q9HB58 689 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 USP29Q9HBJ7 922 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 MARK1Q9P0L2 795 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 SIT1Q9Y3P8 196 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 NEU2Q9Y3R4 380 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 MIA3Q5JRA6 1907 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 ATRXP46100 2492 aa11.32□□□□□ -0.6
SF3B3-205ENST00000564899 A0A0A0MRY4 1105 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 A0A0D9SEW6 157 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ESYT3A0FGR9 886 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 C5orf60A6NFR6 353 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 KCNK1O00180 336 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 MATN3O15232 486 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 MAFKO60675 156 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ECI2O75521 394 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CYP17A1P05093 508 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ADH5P11766 374 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 TYRP14679 529 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ARSAP15289 507 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CD72P21854 359 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 TGM1P22735 817 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CCNCP24863 283 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms