RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ILKQ13418 452 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 HSP90AA4PQ58FG1 418 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 CDKAL1Q5VV42 579 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 TAF3Q5VWG9 929 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 LAYNQ6UX15 382 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 Q6ZVU0 165 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 ZSCAN30Q86W11 494 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 ANKRD20A12PQ8NF67 263 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 OR2A12Q8NGT7 310 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 CPA5Q8WXQ8 436 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 PPP1R16AQ96I34 528 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 PSMB7Q99436 277 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 HDAC8Q9BY41 377 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 ZYG11BQ9C0D3 744 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 OSBPL2Q9H1P3 480 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 ANLNQ9NQW6 1124 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 GOLGA4Q13439 2230 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 ANKRD11Q6UB99 2663 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-204ENST00000564664 DMXL2Q8TDJ6 3036 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 ZZEF1O43149 2961 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 LRRC10BA6NIK2 292 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 I6L893 689 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 WNT9AO14904 365 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 SRGAP2O75044 1071 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 TFE3P19532 575 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 SOX5P35711 763 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 FLT3P36888 993 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 STAT1P42224 750 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 GEMIN4P57678 1058 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 PPP2CBP62714 309 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 PPP2CAP67775 309 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 SHBQ15464 509 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 NAA35Q5VZE5 725 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 RBM43Q6ZSC3 357 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 DCP2Q8IU60 420 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 PCDH20Q8N6Y1 951 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 ISG20Q96AZ6 181 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 KLHDC7BQ96G42 594 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 VPS16Q9H269 839 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 GANQ9H2C0 597 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 TAB2Q9NYJ8 693 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 MPP6Q9NZW5 540 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 OR12D3Q9UGF7 316 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 IL36AQ9UHA7 158 aa12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-204ENST00000564664 PKD1L2Q7Z442 2459 aa12.46□□□□□ -0.42
GTF3C1-204ENST00000564664 ACACAQ13085 2346 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 PLXNB3Q9ULL4 1909 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 TMEM131Q92545 1883 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 A0A0D9SEW6 157 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 GOLGA8SH3BPF8 625 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 TAF4O00268 1085 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 ENC1O14682 589 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 SNAP91O60641 907 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 ZMPSTE24O75844 475 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 GFPT2O94808 682 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 EPHA8P29322 1005 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 SDC4P31431 198 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 ADRA1BP35368 520 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 GGCXP38435 758 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 PTPN9P43378 593 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 MAPKAPK2P49137 400 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 GSCP56915 257 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 JAM2P57087 298 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 TAS2R38P59533 333 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 POLR2FP61218 127 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 IL9RQ01113 521 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 GNA12Q03113 381 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 KRT31Q15323 416 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 PIP5KL1Q5T9C9 394 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 ERN2Q76MJ5 926 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 STRADAQ7RTN6 431 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 TFAP2DQ7Z6R9 452 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 HORMAD1Q86X24 394 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 CACTIN-AS1Q8N1I8 211 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 TMEM145Q8NBT3 493 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 CENPIQ92674 756 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 IFT43Q96FT9 208 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 LRIG1Q96JA1 1093 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 CNDP2Q96KP4 475 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 CFAP57Q96MR6 1250 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 GBP4Q96PP9 640 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 SPON2Q9BUD6 331 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 KLHL11Q9NVR0 708 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 ANO10Q9NW15 660 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 ZNF212Q9UDV6 495 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 HS3ST3A1Q9Y663 406 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 COL5A1P20908 1838 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 PTPRBP23467 1997 aa12.45□□□□□ -0.42
GTF3C1-204ENST00000564664 PLXNA2O75051 1894 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 A0A1W2PQU0 124 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 GOLGA8CPA6NN73 597 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 K7ERQ8 282 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 CBX4O00257 560 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 PLK4O00444 970 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 KPNA3O00505 521 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms