RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 SLC10A6Q3KNW5 377 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 ZACNQ401N2 412 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 KCTD21Q4G0X4 260 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 FAM26DQ5JW98 314 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 UBXN11Q5T124 520 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 TEDDM1Q5T9Z0 273 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 DEPDC1Q5TB30 811 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 MBLAC2Q68D91 279 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 JADE1Q6IE81 842 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 LLGL2Q6P1M3 1020 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 SLC39A5Q6ZMH5 540 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 GPR141Q7Z602 305 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 IGDCC3Q8IVU1 814 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 ADAMTS16Q8TE57 1224 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 ISOC1Q96CN7 298 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 ZNF597Q96LX8 424 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 C11orf70Q9BRQ4 267 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 SEZ6LQ9BYH1 1024 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 KLHL11Q9NVR0 708 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 PTBP2Q9UKA9 531 aaKnown RBP11.27□□□□□ -0.6
TCF4-222ENST00000564228 SLC8A2Q9UPR5 921 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 RNF11Q9Y3C5 154 aa11.27□□□□□ -0.6
TCF4-222ENST00000564228 TDRD15B5MCY1 1934 aaKnown RBP11.27□□□□□ -0.61
TCF4-222ENST00000564228 SCN1AP35498 2009 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 TCRBV7S3A2A0A539 114 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 TPD52L2O43399 206 aaKnown RBP11.27□□□□□ -0.61
TCF4-222ENST00000564228 HLA-DRAP01903 254 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 FUCA1P04066 466 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 INHBBP09529 407 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 GRK2P25098 689 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 TTKP33981 857 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 GABRB2P47870 512 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 YWHAGP61981 247 aaKnown RBP eCLIP11.27□□□□□ -0.61
TCF4-222ENST00000564228 FLOT2Q14254 428 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 DUOXA2Q1HG44 320 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 ZNF362Q5T0B9 420 aaPredicted RBP11.27□□□□□ -0.61
TCF4-222ENST00000564228 NEPROQ6NW34 567 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 SLC2A7Q6PXP3 512 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 TIFABQ6ZNK6 161 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 C15orf39Q6ZRI6 1047 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 POLNQ7Z5Q5 900 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 CENPSQ8N2Z9 138 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 UBR7Q8N806 425 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 TMEM102Q8N9M5 508 aaPredicted RBP11.27□□□□□ -0.61
TCF4-222ENST00000564228 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 PPP1R14CQ8TAE6 165 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 TMIGD2Q96BF3 282 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 EFHD2Q96C19 240 aaPredicted RBP11.27□□□□□ -0.61
TCF4-222ENST00000564228 RMND5BQ96G75 393 aaPredicted RBP11.27□□□□□ -0.61
TCF4-222ENST00000564228 ANKRD36BP1Q96IX9 119 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 DOK1Q99704 481 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 OLFM1Q99784 485 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 LIN28AQ9H9Z2 209 aaKnown RBP11.27□□□□□ -0.61
TCF4-222ENST00000564228 TRPC7Q9HCX4 862 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 GIN1Q9NXP7 522 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
TCF4-222ENST00000564228 TMEM191CA6NGB0 347 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 CYB561D2O14569 222 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 CNOT3O75175 753 aaKnown RBP11.26□□□□□ -0.61
TCF4-222ENST00000564228 RECQL4O94761 1208 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 VNN1O95497 513 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 CD4P01730 458 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 TNNC2P02585 160 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 CNTFP26441 200 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 SLC1A6P48664 564 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 NUMBP49757 651 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 SLC5A3P53794 718 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 OTUD4Q01804 1114 aaKnown RBP11.26□□□□□ -0.61
TCF4-222ENST00000564228 TAP1Q03518 808 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 BFSP2Q13515 415 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 SEPT6Q14141 434 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 TAZQ16635 292 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 TRIM60Q495X7 471 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 ATP13A4Q4VNC1 1196 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 ZFYVE27Q5T4F4 411 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 METTL21CQ5VZV1 264 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 SCARA3Q6AZY7 606 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 C16orf46Q6P387 395 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 BBS12Q6ZW61 710 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 LRRC8DQ7L1W4 858 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 LILRA2Q8N149 483 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 NIPA2Q8N8Q9 360 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 HSPH1Q92598 858 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 KIF12Q96FN5 646 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 TDRD1Q9BXT4 1180 aaKnown RBP11.26□□□□□ -0.61
TCF4-222ENST00000564228 PAIP1Q9H074 479 aaKnown RBP11.26□□□□□ -0.61
TCF4-222ENST00000564228 CXCL16Q9H2A7 254 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 ASB7Q9H672 318 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 CLK4Q9HAZ1 481 aaKnown RBP11.26□□□□□ -0.61
TCF4-222ENST00000564228 C1orf112Q9NSG2 853 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 RNF19AQ9NV58 838 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 KLK14Q9P0G3 267 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 GIT1Q9Y2X7 761 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 IPPQ9Y573 584 aa11.26□□□□□ -0.61
TCF4-222ENST00000564228 A0A087WXM4 84 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ARHGEF37A1IGU5 675 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 SLC22A2O15244 555 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms