RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HTR3CQ8WXA8 447 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 RSAD2Q8WXG1 361 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 RUBCNQ92622 972 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 RTP4Q96DX8 246 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ALG14Q96F25 216 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 FERMT1Q9BQL6 677 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 FEM1AQ9BSK4 669 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 MUC3BQ9H195 1237 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ANKZF1Q9H8Y5 726 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 KCNK12Q9HB15 430 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ATP13A1Q9HD20 1204 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 TRPV5Q9NQA5 729 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 LIMD1Q9UGP4 676 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 DOCK8Q8NF50 2099 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 GVINP1Q7Z2Y8 2422 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 CXorf51AA0A1B0GTR3 108 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 FAM187AA6NFU0 413 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 OTOL1A6NHN0 477 aaPredicted RBP13.18□□□□□ -0.3
SPG7-209ENST00000564047 LOC730098B7Z3J9 87 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 PROB1E7EW31 1015 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 H0Y858 1186 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 MATN3O15232 486 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 KCNN4O15554 427 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 GAS8O95995 478 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 VAV1P15498 845 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 MZF1P28698 734 aaPredicted RBP13.18□□□□□ -0.3
SPG7-209ENST00000564047 HLA-FP30511 346 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 CD70P32970 193 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 NUBP1P53384 320 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 FAM193AP78312 1265 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 DMC1Q14565 340 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 GAB4Q2WGN9 574 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 IL31Q6EBC2 164 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 C8orf74Q6P047 294 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 WDR93Q6P2C0 686 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 ARHGAP36Q6ZRI8 547 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 B4GALNT4Q76KP1 1039 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 GSTA5Q7RTV2 222 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 KIAA0907Q7Z7F0 614 aaPredicted RBP13.18□□□□□ -0.3
SPG7-209ENST00000564047 ZNF354CQ86Y25 554 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 SLC44A3Q8N4M1 653 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 FAM71DQ8N9W8 422 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 DCAF4L2Q8NA75 395 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 ACDQ96AP0 544 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 SPON2Q9BUD6 331 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 C10orf88Q9H8K7 445 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 SP110Q9HB58 689 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 GTSE1Q9NYZ3 720 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 GGA2Q9UJY4 613 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 VPS28Q9UK41 221 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 HPCAL4Q9UM19 191 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 SLC27A6Q9Y2P4 619 aa13.18□□□□□ -0.3
SPG7-209ENST00000564047 KIF26AQ9ULI4 1882 aaPredicted RBP13.18□□□□□ -0.3
SPG7-209ENST00000564047 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 C5orf60A6NFR6 353 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 ZSCAN5CA6NGD5 496 aaPredicted RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 J3KR12 359 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 SGK1O00141 431 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 RAD51CO43502 376 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 PRAMEF11O60813 436 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 TULP3O75386 442 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 STK10O94804 968 aaKnown RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 PEX11BO96011 259 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 CISD3P0C7P0 127 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 PABPC1P11940 636 aaKnown RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 GJA4P35212 333 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 EIF2DP41214 584 aaKnown RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 DGKGP49619 791 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 GDF10P55107 478 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 IFI35P80217 286 aaPredicted RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 CBX1P83916 185 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 GABPB1Q06547 395 aaPredicted RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 P3H1Q32P28 736 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 PLEKHG6Q3KR16 790 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 PITRM1Q5JRX3 1037 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 JAMLQ86YT9 394 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 APCDD1Q8J025 514 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 NAT16Q8N8M0 369 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 CSGALNACT1Q8TDX6 532 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 NSMCE1Q8WV22 266 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 MAML1Q92585 1016 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 DNASE1L2Q92874 299 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 ZNF599Q96NL3 588 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 VAT1Q99536 393 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 LRRC1Q9BTT6 524 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 C2orf49Q9BVC5 232 aaPredicted RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 PDFQ9HBH1 243 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 ABCB8Q9NUT2 735 aa13.17□□□□□ -0.3
SPG7-209ENST00000564047 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
SPG7-209ENST00000564047 INTS6Q9UL03 887 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms