RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 TJP2Q9UDY2 1190 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 PRELID3BQ9Y3B1 194 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 CRYBG1Q9Y4K1 1723 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 A0A1W2PP64 1363 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 ABCC6O95255 1503 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 USP17L13C9JLJ4 530 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 USP17L17D6RBQ6 530 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 ZNF197O14709 1029 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 SMAD9O15198 467 aaKnown RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 DENRO43583 198 aaKnown RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 FABP1P07148 127 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 CD63P08962 238 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 SPATA31D3P0C874 917 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 STAG3L3P0CL85 134 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 PF4V1P10720 104 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 RALAP11233 206 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 PDIA3P30101 505 aaKnown RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 PIK3CGP48736 1102 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 GNG10P50151 68 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 EIF3EP60228 445 aaKnown RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 HNRNPKP61978 463 aaKnown RBP eCLIP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 TRAF2Q12933 501 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 EMC2Q15006 297 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 SEC23AQ15436 765 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 ZNF805Q5CZA5 627 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 KRT79Q5XKE5 535 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 MSANTD1Q6ZTZ1 278 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 SPATA31D4Q6ZUB0 917 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 TOM1L2Q6ZVM7 507 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 SSX9Q7RTT3 188 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 ERI1Q8IV48 349 aaKnown RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 REM2Q8IYK8 340 aaPredicted RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 IQCKQ8N0W5 287 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 OR4D10Q8NGI6 311 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 DDX1Q92499 740 aaKnown RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 SLC25A36Q96CQ1 311 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 MTBPQ96DY7 904 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 CCNL2Q96S94 520 aaPredicted RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 TM6SF1Q9BZW5 370 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 TP63Q9H3D4 680 aaPredicted RBP6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 MCCC2Q9HCC0 563 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 NPHS2Q9NP85 383 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 GRHPRQ9UBQ7 328 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 PPP2R2CQ9Y2T4 447 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 RREB1Q92766 1687 aa6.03□□□□□ -1.44
TUBGCP4-207ENST00000563963 C5orf60A6NFR6 353 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 TRIM77I1YAP6 450 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PLK4O00444 970 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 TERTO14746 1132 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 ARHGEF9O43307 516 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 GMFGO60234 142 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PGLSO95336 258 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 ITGB6P18564 788 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 GLRA2P23416 452 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 CXCR2P25025 360 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 SERPINB1P30740 379 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 GJC1P36383 396 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 OR3A3P47888 321 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 ALDH3A2P51648 485 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 AFF3P51826 1226 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 VAV2P52735 878 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 RACK1P63244 317 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 ZNF45Q02386 682 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 LMAN2Q12907 356 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 MED21Q13503 144 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 DDX39BQ13838 428 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 KCNC3Q14003 757 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 RRP1BQ14684 758 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 GRM3Q14832 879 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 SULT1C3Q6IMI6 304 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PRMT9Q6P2P2 845 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 CYP20A1Q6UW02 462 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 FAM217AQ8IXS0 508 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 ADCY4Q8NFM4 1077 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 CHPT1Q8WUD6 406 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PRCCQ92733 491 aaPredicted RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 TOE1Q96GM8 510 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 BIRC8Q96P09 236 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 C1QTNF7Q9BXJ2 289 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 HOXD1Q9GZZ0 328 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 Q9H521 79 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 CNOT10Q9H9A5 744 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PDE7BQ9NP56 450 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 SLC39A10Q9ULF5 831 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 DTX4Q9Y2E6 619 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 SNAP23O00161 211 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PDE2AO00408 941 aaPredicted RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PITPNM1O00562 1244 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 NOP56O00567 594 aaKnown RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 KRT36O76013 467 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PGK2P07205 417 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 TPBGLP0DKB5 382 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 ENO3P13929 434 aaPredicted RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 HOXB8P17481 243 aaPredicted RBP6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 RAB3AP20336 220 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 SNTA1Q13424 505 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 ARID5BQ14865 1188 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 CCDC142Q17RM4 750 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 PIK3R6Q5UE93 754 aa6.02□□□□□ -1.45
TUBGCP4-207ENST00000563963 RBM44Q6ZP01 1051 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms