RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
RNF40-205ENST00000563909 GCLMP48507 274 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 PIK3R6Q5UE93 754 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 ZCCHC8Q6NZY4 707 aaKnown RBP16.39■□□□□ 0.21
RNF40-205ENST00000563909 IRF2BP1Q8IU81 584 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 ZNF557Q8N988 423 aaPredicted RBP16.39■□□□□ 0.21
RNF40-205ENST00000563909 ZSCAN1Q8NBB4 408 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 TMEM145Q8NBT3 493 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 SLC35C1Q96A29 364 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 SAMSN1Q9NSI8 373 aaKnown RBP16.39■□□□□ 0.21
RNF40-205ENST00000563909 DNAJC28Q9NX36 388 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 NCKIPSDQ9NZQ3 722 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 SFMBT1Q9UHJ3 866 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 CEP83Q9Y592 693 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 PCDHGA7Q9Y5G6 932 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 PCDHGA4Q9Y5G9 962 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.39■□□□□ 0.21
RNF40-205ENST00000563909 FBN2P35556 2912 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 TDRD6O60522 2096 aaKnown RBP16.39■□□□□ 0.21
RNF40-205ENST00000563909 BECN2A8MW95 431 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 SLC7A4O43246 635 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 RNGTTO60942 597 aaKnown RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 KRT38O76015 456 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 HLA-DRAP01903 254 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 PRLRP16471 622 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 MXI1P50539 228 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 NCAPHQ15003 741 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 RNF219Q5W0B1 726 aaPredicted RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 MMS22LQ6ZRQ5 1243 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 AOPEPQ8N6M6 819 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 OR13H1Q8NG92 308 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 NDRG1Q92597 394 aaKnown RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 KLK6Q92876 244 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 PTPRN2Q92932 1015 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 FAM131CQ96AQ9 280 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 RPL10LQ96L21 214 aaKnown RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 IMPG2Q9BZV3 1241 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 OLA1Q9NTK5 396 aaKnown RBP16.38■□□□□ 0.21
RNF40-205ENST00000563909 FANCLQ9NW38 375 aa16.38■□□□□ 0.21
RNF40-205ENST00000563909 PLD2O14939 933 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 CASC3O15234 703 aaKnown RBP16.37■□□□□ 0.21
RNF40-205ENST00000563909 PMM2O15305 246 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 P4HA2O15460 535 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 CD58P19256 250 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 SLC6A4P31645 630 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 FMO5P49326 533 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 ECT2LQ008S8 904 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 CETN1Q12798 172 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 CNTN1Q12860 1018 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 TCP11X2Q5H9J9 407 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 PITRM1Q5JRX3 1037 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 MANEAQ5SRI9 462 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 VASH2Q86V25 355 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 CARNMT1Q8N4J0 409 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 ANKRD20A12PQ8NF67 263 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 RNF139Q8WU17 664 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 EDEM1Q92611 657 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 LIN37Q96GY3 246 aaPredicted RBP16.37■□□□□ 0.21
RNF40-205ENST00000563909 NOX5Q96PH1 765 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 DNAI2Q9GZS0 605 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 TSPY26PQ9H489 355 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 CYP3A43Q9HB55 503 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 APOBEC3GQ9HC16 384 aaKnown RBP16.37■□□□□ 0.21
RNF40-205ENST00000563909 PLEKHB1Q9UF11 243 aaPredicted RBP16.37■□□□□ 0.21
RNF40-205ENST00000563909 DOCK9Q9BZ29 2069 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 ITIH6Q6UXX5 1313 aa16.37■□□□□ 0.21
RNF40-205ENST00000563909 CELSR2Q9HCU4 2923 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 EME2A4GXA9 379 aaPredicted RBP16.36■□□□□ 0.21
RNF40-205ENST00000563909 MSI1O43347 362 aaKnown RBP16.36■□□□□ 0.21
RNF40-205ENST00000563909 ZBED1O96006 694 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 TPM2P07951 284 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 LIPCP11150 499 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 PRKCSHP14314 528 aaPredicted RBP16.36■□□□□ 0.21
RNF40-205ENST00000563909 VAV1P15498 845 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 CDK11BP21127 795 aaKnown RBP16.36■□□□□ 0.21
RNF40-205ENST00000563909 CASRP41180 1078 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 TKTL1P51854 596 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 PDX1P52945 283 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 HNRNPKP61978 463 aaKnown RBP eCLIP16.36■□□□□ 0.21
RNF40-205ENST00000563909 DRAP1Q14919 205 aaPredicted RBP16.36■□□□□ 0.21
RNF40-205ENST00000563909 MAN2A1Q16706 1144 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 CBWD6Q4V339 395 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 HSP90AA4PQ58FG1 418 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 FSCBQ5H9T9 825 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 CBWD3Q5JTY5 395 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 CBWD5Q5RIA9 395 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 PERM1Q5SV97 790 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 CDKAL1Q5VV42 579 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 DSG4Q86SJ6 1040 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 PIGZQ86VD9 579 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 CCDC117Q8IWD4 279 aaPredicted RBP16.36■□□□□ 0.21
RNF40-205ENST00000563909 SLC22A18ASQ8N1D0 253 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 FBXO39Q8N4B4 442 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 CCDC150Q8NCX0 1101 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 FBXL13Q8NEE6 735 aa16.36■□□□□ 0.21
RNF40-205ENST00000563909 ZNF548Q8NEK5 533 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms