RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MTM1Q13496 603 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 SPDYCQ5MJ68 293 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 LEKR1Q6ZMV7 388 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 TRMT10CQ7L0Y3 403 aaKnown RBP22.38■■□□□ 1.17
LINC01960-201ENST00000563759 SERPINB12Q96P63 405 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 RUFY1Q96T51 708 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 PABPC3Q9H361 631 aaKnown RBP22.38■■□□□ 1.17
LINC01960-201ENST00000563759 SEMA4AQ9H3S1 761 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 DENND4AQ7Z401 1863 aa22.38■■□□□ 1.17
LINC01960-201ENST00000563759 MMP13P45452 471 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 SARNPP82979 210 aaKnown RBP22.37■■□□□ 1.17
LINC01960-201ENST00000563759 CDK16Q00536 496 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 SLC10A7Q0GE19 358 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 PRPSAP1Q14558 356 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 FSCBQ5H9T9 825 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 TMCO4Q5TGY1 634 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 CES5AQ6NT32 575 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 ZBED8Q8IZ13 594 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 PHACTR1Q9C0D0 580 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 TTYH1Q9H313 450 aaPredicted RBP22.37■■□□□ 1.17
LINC01960-201ENST00000563759 WNT6Q9Y6F9 365 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 TMEM265A0A087WTH1 108 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.37■■□□□ 1.17
LINC01960-201ENST00000563759 GOLGA6CA6NDK9 693 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 CBX4O00257 560 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 SLC9A3R1O14745 358 aaPredicted RBP22.37■■□□□ 1.17
LINC01960-201ENST00000563759 GOLGA6DP0CG33 693 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 WEE1P30291 646 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 LBRQ14739 615 aaKnown RBP22.37■■□□□ 1.17
LINC01960-201ENST00000563759 FNBP1LQ5T0N5 605 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 DENND2CQ68D51 928 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 OTOP3Q7RTS5 596 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 MCUQ8NE86 351 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 WFDC5Q8TCV5 224 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 OTUB2Q96DC9 234 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 PDFQ9HBH1 243 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 NT5MQ9NPB1 228 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 CLDND1Q9NY35 253 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 GOLGA6AQ9NYA3 693 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 GDE1Q9NZC3 331 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 VPS28Q9UK41 221 aa22.37■■□□□ 1.17
LINC01960-201ENST00000563759 KDELR3O43731 214 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 MAGEA4P43358 317 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 ZNF235Q14590 738 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 BBS9Q3SYG4 887 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 FAM78AQ5JUQ0 283 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 HP1BP3Q5SSJ5 553 aaPredicted RBP22.36■■□□□ 1.17
LINC01960-201ENST00000563759 MTERF4Q7Z6M4 381 aaKnown RBP22.36■■□□□ 1.17
LINC01960-201ENST00000563759 RELL1Q8IUW5 271 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 SMARCD2Q92925 531 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 ZBTB9Q96C00 473 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 ZNF599Q96NL3 588 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 ASB16Q96NS5 453 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 GORASP1Q9BQQ3 440 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 GLOD4Q9HC38 313 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 PLAAQ9Y263 795 aa22.36■■□□□ 1.17
LINC01960-201ENST00000563759 ANKRD36A6QL64 1941 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 KIF26AQ9ULI4 1882 aaPredicted RBP22.35■■□□□ 1.17
LINC01960-201ENST00000563759 NEDD8-MDP1E9PL57 170 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 EIF3HO15372 352 aaKnown RBP eCLIP22.35■■□□□ 1.17
LINC01960-201ENST00000563759 TBX10O75333 385 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 BANF1O75531 89 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 ACSL3O95573 720 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 GLDCP23378 1020 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 CSKP41240 450 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 VIPR2P41587 438 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 GRIN2CQ14957 1233 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 FASTKD3Q14CZ7 662 aaKnown RBP22.35■■□□□ 1.17
LINC01960-201ENST00000563759 ATAT1Q5SQI0 421 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 FYB2Q5VWT5 728 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 ALS2CLQ60I27 953 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 BBS5Q8N3I7 341 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 C9orf72Q96LT7 481 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 PPP1R2P1Q96PQ5 205 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 BBS2Q9BXC9 721 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 ACE2Q9BYF1 805 aaPredicted RBP22.35■■□□□ 1.17
LINC01960-201ENST00000563759 XAB2Q9HCS7 855 aaKnown RBP22.35■■□□□ 1.17
LINC01960-201ENST00000563759 HAUS2Q9NVX0 235 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 CLEC1BQ9P126 229 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 MTCH2Q9Y6C9 303 aa22.35■■□□□ 1.17
LINC01960-201ENST00000563759 ERI2A8K979 691 aaKnown RBP22.34■■□□□ 1.17
LINC01960-201ENST00000563759 RIPK2O43353 540 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 AP2A1O95782 977 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 MZF1P28698 734 aaPredicted RBP22.34■■□□□ 1.17
LINC01960-201ENST00000563759 ITKQ08881 620 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 MSS51Q4VC12 460 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 TMEM25Q86YD3 366 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 ZIM3Q96PE6 472 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 FCRL5Q96RD9 977 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 FEM1AQ9BSK4 669 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 LINC00597Q9H2U6 94 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 SPHK2Q9NRA0 654 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 NINJ2Q9NZG7 142 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 UBP1Q9NZI7 540 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 UBA2Q9UBT2 640 aaPredicted RBP22.34■■□□□ 1.17
LINC01960-201ENST00000563759 COLQQ9Y215 455 aaPredicted RBP22.34■■□□□ 1.17
LINC01960-201ENST00000563759 AAR2Q9Y312 384 aaKnown RBP22.34■■□□□ 1.17
LINC01960-201ENST00000563759 E7ESA3 106 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 AVILO75366 819 aa22.34■■□□□ 1.17
LINC01960-201ENST00000563759 ANXA9O76027 345 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms