RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 PLPP4Q5VZY2 271 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 AFMIDQ63HM1 303 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 RAP1GAP2Q684P5 730 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 PID1Q7Z2X4 250 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 PRUNE1Q86TP1 453 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 NLRP14Q86W24 1093 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 CCNJLQ8IV13 435 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 RIBC1Q8N443 379 aaPredicted RBP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 NPWQ8N729 165 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 RNF217Q8TC41 542 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 SPPL3Q8TCT6 385 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 PYROXD1Q8WU10 500 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 TGS1Q96RS0 853 aaKnown RBP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 C10orf88Q9H8K7 445 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 ALG13Q9NP73 1137 aaKnown RBP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 SAYSD1Q9NPB0 183 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 ASAH2Q9NR71 780 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 SEPT10Q9P0V9 454 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 LSM7Q9UK45 103 aaKnown RBP9.92□□□□□ -0.82
UBFD1-202ENST00000563366 ZNF510Q9Y2H8 683 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 HCN4Q9Y3Q4 1203 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 MFHAS1Q9Y4C4 1052 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 NUP205Q92621 2012 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 CHD5Q8TDI0 1954 aa9.92□□□□□ -0.82
UBFD1-202ENST00000563366 A6NNZ2 444 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 TTLL8A6PVC2 850 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 H0YGN5 161 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 DFFAO00273 331 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 MATN3O15232 486 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ALOX15BO15296 676 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 RAMP2O60895 175 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 XYLBO75191 536 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 CLDN11O75508 207 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 TCEA3O75764 348 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 STC2O76061 302 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 TMEM63AO94886 807 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ACSL3O95573 720 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 SYF2O95926 243 aaKnown RBP9.91□□□□□ -0.82
UBFD1-202ENST00000563366 F11P03951 625 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 HMBSP08397 361 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 POU2F2P09086 479 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 MBL2P11226 248 aaPredicted RBP9.91□□□□□ -0.82
UBFD1-202ENST00000563366 TACR2P21452 398 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 GABRR2P28476 465 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 CLCN4P51793 760 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ERVFC1P60507 584 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ZNF844Q08AG5 666 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 TUBB8Q3ZCM7 444 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 TEX44Q53QW1 395 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ARHGAP15Q53QZ3 475 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ADGRF1Q5T601 910 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 AGBL2Q5U5Z8 902 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 FBXL22Q6P050 247 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 CHST9Q7L1S5 443 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 LYSMD3Q7Z3D4 306 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 PRICKLE2Q7Z3G6 844 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ZBED8Q8IZ13 594 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ZNF683Q8IZ20 524 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ZNF567Q8N184 647 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ARFGAP2Q8N6H7 521 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 PGM2Q96G03 612 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 ATP6V1G3Q96LB4 118 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 SERPINB12Q96P63 405 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 PRMT1Q99873 361 aaKnown RBP9.91□□□□□ -0.82
UBFD1-202ENST00000563366 C17orf80Q9BSJ5 609 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 NAT9Q9BTE0 207 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 LMAN2LQ9H0V9 348 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 GBA3Q9H227 469 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 NINJ2Q9NZG7 142 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 FETUBQ9UGM5 382 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 RSPH14Q9UHP6 348 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 STOML2Q9UJZ1 356 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 AAR2Q9Y312 384 aaKnown RBP9.91□□□□□ -0.82
UBFD1-202ENST00000563366 NFS1Q9Y697 457 aa9.91□□□□□ -0.82
UBFD1-202ENST00000563366 MYO18AQ92614 2054 aaKnown RBP9.91□□□□□ -0.82
UBFD1-202ENST00000563366 MKI67P46013 3256 aaKnown RBP9.9□□□□□ -0.82
UBFD1-202ENST00000563366 TRAV19A0A0A6YYK7 116 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 A0A1B0GVM2 712 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 TCAF2A6NFQ2 919 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 H3BQF6 201 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 KCNK1O00180 336 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 RASGRF2O14827 1237 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 MAFKO60675 156 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 CDH16O75309 829 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ANXA9O76027 345 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 CKMP06732 381 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 CCNB1P14635 433 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 PTPN2P17706 415 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 HDCP19113 662 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 PTPN3P26045 913 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 OR1E1P30953 314 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 CORO1AP31146 461 aaKnown RBP9.9□□□□□ -0.82
UBFD1-202ENST00000563366 IFNAR2P48551 515 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 RENBPP51606 427 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 CDH4P55283 916 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ERVK-21P61565 698 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 IL10RBQ08334 325 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 WASHC5Q12768 1159 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms