RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ARHGEF38Q9NXL2 777 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 WWOXQ9NZC7 414 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ARHGAP20Q9P2F6 1191 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CYTH4Q9UIA0 394 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 RNF24Q9Y225 148 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ZNF510Q9Y2H8 683 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 DMRT1Q9Y5R6 373 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 SH3TC1Q8TE82 1336 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 GOLGA8OA6NCC3 632 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 C5orf51A6NDU8 294 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 GOLGA8NF8WBI6 632 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 C2CD2LO14523 706 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 TADA2AO75478 443 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 DDAH2O95865 285 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ITGA2BP08514 1039 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 SERPINF2P08697 491 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CLUP10909 449 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 U2AF2P26368 475 aaKnown RBP eCLIP4.89□□□□□ -1.631e-6■■■□□ 17.9
SMG1-207ENST00000563235 TKTP29401 623 aaKnown RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 BAG6P46379 1132 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PSMD7P51665 324 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 LCP2Q13094 533 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 DUSP4Q13115 394 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CBFBQ13951 182 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 NFIXQ14938 502 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CHRNA6Q15825 494 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 MOGQ16653 247 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 GPAT3Q53EU6 434 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 METAP1DQ6UB28 335 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 CYP20A1Q6UW02 462 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CHST3Q7LGC8 479 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 TCP11Q8WWU5 503 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 SLC9A6Q92581 669 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 EAF2Q96CJ1 260 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 CCDC51Q96ER9 411 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PGM2Q96G03 612 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 SLC35A4Q96G79 324 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 TMEM68Q96MH6 324 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 WDR18Q9BV38 432 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CELF4Q9BZC1 486 aaKnown RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 SLC26A1Q9H2B4 701 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 SLC35C2Q9NQQ7 365 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 KLC4Q9NSK0 619 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ZFP57Q9NU63 452 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ABCB8Q9NUT2 735 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 LARSQ9P2J5 1176 aaKnown RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 STX18Q9P2W9 335 aaKnown RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 ZNF70Q9UC06 446 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 PCDHB6Q9Y5E3 794 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 LYVE1Q9Y5Y7 322 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ARHGAP35Q9NRY4 1499 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MBD5Q9P267 1494 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SPATA31A3Q5VYP0 1347 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 TRBV23OR9-2A0A075B6M9 112 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 TARSL2A2RTX5 802 aaKnown RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 ZNF716A6NP11 495 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 F8W810 466 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ANGPT2O15123 496 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 PHGDHO43175 533 aaKnown RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 AKR7A2O43488 359 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 DXOO77932 396 aaKnown RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 ZNF735P0CB33 412 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 UMPSP11172 480 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 AGAP20933 346 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SLC26A2P50443 739 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 DGKEP52429 567 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MGAT5Q09328 741 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 NIPAL4Q0D2K0 466 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SF3A3Q12874 501 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMG1-207ENST00000563235 DMC1Q14565 340 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 WDR43Q15061 677 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMG1-207ENST00000563235 GAB4Q2WGN9 574 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SLC35F1Q5T1Q4 408 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SCUBE3Q8IX30 993 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 CSGALNACT2Q8N6G5 542 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ZNF784Q8NCA9 323 aaPredicted RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 SETD6Q8TBK2 473 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MSLNLQ96KJ4 702 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SUSD3Q96L08 255 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 TESK2Q96S53 571 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ZNF341Q9BYN7 854 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 TWSG1Q9GZX9 223 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 LRRC19Q9H756 370 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 CBX8Q9HC52 389 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 C8orf4Q9NR00 106 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ASNSD1Q9NWL6 643 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMG1-207ENST00000563235 ANKMY1Q9P2S6 941 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 ATP6V1HQ9UI12 483 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 DAPP1Q9UN19 280 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MTMR6Q9Y217 621 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MSCO60682 206 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 CBFA2T3O75081 653 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 SLCO2B1O94956 709 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 PENKP01210 267 aaPredicted RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 UQCRFS1P1P0C7P4 283 aa4.88□□□□□ -1.63
SMG1-207ENST00000563235 MAP4P27816 1152 aaKnown RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 TRHRP34981 398 aaPredicted RBP4.88□□□□□ -1.63
SMG1-207ENST00000563235 ETV5P41161 510 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms