RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GNA12Q03113 381 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 STARD3Q14849 445 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 HNRNPA1L2Q32P51 320 aaKnown RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 KCNT1Q5JUK3 1230 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 RNF219Q5W0B1 726 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 HEATR6Q6AI08 1181 aaKnown RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 CPNE8Q86YQ8 564 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 UMODL1-AS1Q8N2C9 162 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 SUMF1Q8NBK3 374 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 SPC24Q8NBT2 197 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 FRS2Q8WU20 508 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 KCTD15Q96SI1 283 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 BAG1Q99933 345 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 C2orf49Q9BVC5 232 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 DHX35Q9H5Z1 703 aaKnown RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 PRSS16Q9NQE7 514 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 VPS51Q9UID3 782 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 VPS28Q9UK41 221 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 REXO2Q9Y3B8 237 aaKnown RBP6.34□□□□□ -1.39
CNOT1-204ENST00000563130 PCDHA13Q9Y5I0 950 aa6.34□□□□□ -1.39
CNOT1-204ENST00000563130 A0A0A6YYK5 440 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 FGF10O15520 208 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ATP9BO43861 1147 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 CREB3O43889 395 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ALDH1A2O94788 518 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 CD160O95971 181 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 IL4RP24394 825 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 PLA2G5P39877 138 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 STK19P49842 368 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ARSEP51690 589 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ARF5P84085 180 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 MAP7D1Q3KQU3 841 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 FNDC3BQ53EP0 1204 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 C9orf64Q5T6V5 341 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 RWDD4Q6NW29 188 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 RFX8Q6ZV50 586 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 POLNQ7Z5Q5 900 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF366Q8N895 744 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 OR7D4Q8NG98 312 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 GAB3Q8WWW8 586 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 PTPRN2Q92932 1015 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ARHGEF2Q92974 986 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 RPL10LQ96L21 214 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 KLC2Q9H0B6 622 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 MUC3BQ9H195 1237 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 MAGEH1Q9H213 219 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 CATSPERBQ9H7T0 1116 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 FBRSQ9HAH7 460 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 GRPEL1Q9HAV7 217 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 CWC15Q9P013 229 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SUN2Q9UH99 717 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 PCDHB9Q9Y5E1 797 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 EML5Q05BV3 1969 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 TARSL2A2RTX5 802 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 TTC34A8MYJ7 566 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 EEF2KO00418 725 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SYNCRIPO60506 623 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SNAP91O60641 907 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 RAMP2O60895 175 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF821O75541 412 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 MT-CO1P00395 513 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SRCP12931 536 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 GOT1P17174 413 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 GLDCP23378 1020 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ACVRL1P37023 503 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ETFBP38117 255 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 P2RY2P41231 377 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 NUMBP49757 651 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 YBEYP58557 167 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 TAS2R40P59535 323 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 TPI1P60174 286 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ST8SIA6P61647 398 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 KRT83P78385 493 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SRSF5Q13243 272 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 DPYSQ14117 519 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SPA17Q15506 151 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SMTNL2Q2TAL5 461 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 AFMIDQ63HM1 303 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 TMPRSS6Q8IU80 811 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SH2D3CQ8N5H7 860 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 OR2T3Q8NH03 318 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 HMGB4Q8WW32 186 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 ZC3H10Q96K80 434 aaKnown RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 TPSD1Q9BZJ3 242 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 RSPH9Q9H1X1 276 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-204ENST00000563130 MTG2Q9H4K7 406 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 LRRC19Q9H756 370 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 DNAI1Q9UI46 699 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 SALL4Q9UJQ4 1053 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 TFR2Q9UP52 801 aa6.33□□□□□ -1.4
CNOT1-204ENST00000563130 GPR179Q6PRD1 2367 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 EDDM13A0A1B0GTR0 161 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 BTNL10A8MVZ5 291 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 PJA2O43164 708 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 SIN3BO75182 1162 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF217O75362 1048 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 RPP40O75818 363 aaKnown RBP6.32□□□□□ -1.4
CNOT1-204ENST00000563130 IGLV3-19P01714 112 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 ERCC2P18074 760 aa6.32□□□□□ -1.4
CNOT1-204ENST00000563130 NNMTP40261 264 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms