RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 GARSP41250 739 aaKnown RBP19.2■□□□□ 0.66
RAB40C-207ENST00000563109 IL12RB1P42701 662 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 STARD3Q14849 445 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 ACCSLQ4AC99 568 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 TIGD7Q6NT04 549 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-207ENST00000563109 NPNTQ6UXI9 565 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 TP53INP2Q8IXH6 220 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 SH2D3CQ8N5H7 860 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 CCDC33Q8N5R6 958 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 TTC13Q8NBP0 860 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 CCNYQ8ND76 341 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 MRGPRX3Q96LB0 322 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 ACOX2Q99424 681 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 BRD8Q9H0E9 1235 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 HCN2Q9UL51 889 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 MMP17Q9ULZ9 603 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 SNX12Q9UMY4 172 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 TTC28Q96AY4 2481 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 SYNCRIPO60506 623 aaKnown RBP19.19■□□□□ 0.66
RAB40C-207ENST00000563109 CHRM1P11229 460 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-207ENST00000563109 SRCP12931 536 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 HOXB2P14652 356 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 PECAM1P16284 738 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-207ENST00000563109 TCP1P17987 556 aaKnown RBP19.19■□□□□ 0.66
RAB40C-207ENST00000563109 WASP42768 502 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 ETF1P62495 437 aaKnown RBP19.19■□□□□ 0.66
RAB40C-207ENST00000563109 ADCY2Q08462 1091 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 LEKR1Q6ZMV7 388 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 ARHGAP36Q6ZRI8 547 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 ZSCAN30Q86W11 494 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 SLC13A5Q86YT5 568 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-207ENST00000563109 SPEM1Q8N4L4 309 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 MAIP1Q8WWC4 291 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 HDAC11Q96DB2 347 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 C16orf45Q96MC5 204 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-207ENST00000563109 ZNF599Q96NL3 588 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 OSBPL9Q96SU4 736 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 GABRG3Q99928 467 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 HERPUD2Q9BSE4 406 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 C1QTNF1Q9BXJ1 281 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 CEP44Q9C0F1 390 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 PDFQ9HBH1 243 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 SUN2Q9UH99 717 aa19.19■□□□□ 0.66
RAB40C-207ENST00000563109 ATG2BQ96BY7 2078 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 EDDM13A0A1B0GTR0 161 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 ANTXRLA6NF34 631 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 J3KR12 359 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 PI15O43692 258 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 ATP9BO43861 1147 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 MAFKO60675 156 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 EPHX1P07099 455 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 PRKCHP24723 683 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 CASQ1P31415 396 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 SLC10A2Q12908 348 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-207ENST00000563109 ENPP2Q13822 863 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 RFTN1Q14699 578 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-207ENST00000563109 INO80DQ53TQ3 878 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-207ENST00000563109 TMCO4Q5TGY1 634 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 C22orf39Q6P5X5 142 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 PKN3Q6P5Z2 889 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 BBS5Q8N3I7 341 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 CCDC114Q96M63 670 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 OLFM3Q96PB7 478 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 TMEM245Q9H330 911 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 HAUS2Q9NVX0 235 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 DLGAP2Q9P1A6 1054 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 SLCO3A1Q9UIG8 710 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 VCANP13611 3396 aa19.18■□□□□ 0.66
RAB40C-207ENST00000563109 TTC34A8MYJ7 566 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 PRR33A8MZF0 331 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 SGK1O00141 431 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 CES2O00748 559 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 MCF2LO15068 1137 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 NEBLO76041 1014 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 TMCC1O94876 653 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 MT-CO1P00395 513 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 HLA-EP13747 358 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 CCNCP24863 283 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 RECQLP46063 649 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 CCR3P51677 355 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 OTUD4Q01804 1114 aaKnown RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 ZNF33AQ06730 810 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 PPIDQ08752 370 aaKnown RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 AP1B1Q10567 949 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 KLF1Q13351 362 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 ZNF235Q14590 738 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 NOMO1Q15155 1222 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 DLG2Q15700 870 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 HNRNPA1L2Q32P51 320 aaKnown RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 TMEM31Q5JXX7 168 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 SYT10Q6XYQ8 523 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 NYAP1Q6ZVC0 841 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 SYT13Q7L8C5 426 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 CCDC13Q8IYE1 715 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 PCDH20Q8N6Y1 951 aaKnown RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 ZNF366Q8N895 744 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 ACTL9Q8TC94 416 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 TFB1MQ8WVM0 346 aaKnown RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 MYO19Q96H55 970 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 TSGA13Q96PP4 275 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms