RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 A0A1B0GUV1 79 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 SMTNL1A8MU46 457 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 KCNJ18B7U540 433 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 H0Y3Z8 333 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 GRM8O00222 908 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 IPO5O00410 1097 aaKnown RBP3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 LCKP06239 509 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 PRSS2P07478 247 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 UMODP07911 640 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 CHRNA5P30532 468 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 GRK6P43250 576 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 TRAPPC10P48553 1259 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 PCYT1AP49585 367 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 CRYZQ08257 329 aaKnown RBP3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 TIGD6Q17RP2 521 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 GRAMD1BQ3KR37 738 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 ARL13AQ5H913 290 aaPredicted RBP3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 FAM83BQ5T0W9 1011 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 RRAGAQ7L523 313 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 GALNT15Q8N3T1 639 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 MYCT1Q8N699 235 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 FSIP1Q8NA03 581 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 OR6Y1Q8NGX8 325 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 THAP4Q8WY91 577 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 CCT6BQ92526 530 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 GOLGA1Q92805 767 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 TAF1DQ9H5J8 278 aaPredicted RBP3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 AAMDCQ9H7C9 122 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 SEPSECSQ9HD40 501 aaKnown RBP3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 DTX4Q9Y2E6 619 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 PKP3Q9Y446 797 aa3.42□□□□□ -1.86
HDGFL3-202ENST00000562702 CXorf65A6NEN9 183 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 FOXO6A8MYZ6 492 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 E7EVH7 732 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 SEPT4O43236 478 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 CCNT1O60563 726 aaKnown RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 TCEA3O75764 348 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 DDNO94850 711 aaPredicted RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 IFNA2P01563 188 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 TFRCP02786 760 aaKnown RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 WNT1P04628 370 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 CHRNB1P11230 501 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 VEGFAP15692 232 aaPredicted RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 HOXB9P17482 250 aaPredicted RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 CDK18Q07002 472 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 DSC1Q08554 894 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 PMPCAQ10713 525 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 ALKBH1Q13686 389 aaKnown RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 DCTN1Q14203 1278 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 SF3B4Q15427 424 aaKnown RBP eCLIP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 TUBB8Q3ZCM7 444 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 GXYLT1Q4G148 440 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 ALG10Q5BKT4 473 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 ALG10BQ5I7T1 473 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 CEP85LQ5SZL2 805 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 JMJD6Q6NYC1 403 aaPredicted RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 PRSS57Q6UWY2 283 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 KIAA1324Q6UXG2 1013 aaKnown RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 IGFN1Q86VF2 1251 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 TMEM200AQ86VY9 491 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 PTGR2Q8N8N7 351 aaPredicted RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 EME1Q96AY2 570 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 ARRDC3Q96B67 414 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 SDCCAG3Q96C92 435 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 TRIM31Q9BZY9 425 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 ABHD16BQ9H3Z7 469 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 G6PC2Q9NQR9 355 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 ARL15Q9NXU5 204 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 SRP68Q9UHB9 627 aaKnown RBP3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 KCND3Q9UK17 655 aa3.41□□□□□ -1.86
HDGFL3-202ENST00000562702 TMEM247A6NEH6 219 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 ERI2A8K979 691 aaKnown RBP3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 HLA-DQA2P01906 255 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 PRPH2P23942 346 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 GSTM2P28161 218 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 HOXD3P31249 432 aaPredicted RBP3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 AARSP49588 968 aaKnown RBP eCLIP3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 RBM5P52756 815 aaKnown RBP eCLIP3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 POU5F1BQ06416 359 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 TRAF2Q12933 501 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 PDCLQ13371 301 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 SMAD1Q15797 465 aaKnown RBP3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 ADCK5Q3MIX3 580 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 ZNF718Q3SXZ3 478 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 SLC30A9Q6PML9 568 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 PARM1Q6UWI2 310 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 SYNE3Q6ZMZ3 975 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 SYT13Q7L8C5 426 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 FAM185AQ8N0U4 392 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 SPEM1Q8N4L4 309 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 SPATA5Q8NB90 893 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 C7orf57Q8NEG2 295 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 IP6K1Q92551 441 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 KAT2AQ92830 837 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 ZNF419Q96HQ0 510 aaPredicted RBP3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 ARPC5LQ9BPX5 153 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 CLPBQ9H078 707 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 ISCUQ9H1K1 167 aa3.4□□□□□ -1.87
HDGFL3-202ENST00000562702 SPAG4Q9NPE6 437 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms