RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 SAMD3Q8N6K7 520 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 ZNF713Q8N859 430 aaPredicted RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 IL31RAQ8NI17 732 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 CRYGNQ8WXF5 182 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 PIBF1Q8WXW3 757 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 ZSCAN31Q96LW9 406 aaPredicted RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 TAAR1Q96RJ0 339 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 SLC26A6Q9BXS9 759 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 CIPCQ9C0C6 399 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 SPRTNQ9H040 489 aaPredicted RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 ZMYND12Q9H0C1 365 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 UPF2Q9HAU5 1272 aaKnown RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 RIC8AQ9NPQ8 531 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 ANLNQ9NQW6 1124 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 GJB4Q9NTQ9 266 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 MAP3K20Q9NYL2 800 aaKnown RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 KLHL13Q9P2N7 655 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 GABBR1Q9UBS5 961 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 ISY1Q9ULR0 285 aaKnown RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 MRPL11Q9Y3B7 192 aaKnown RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 MYH7BA7E2Y1 1941 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 PFASO15067 1338 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 LOC102724159A0A0B4J2E5 919 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 IKBKBO14920 756 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 CTAGE5O15320 804 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 DHX16O60231 1041 aaKnown RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 DEXIO95424 95 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 VNN1O95497 513 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 CYP2A6P11509 494 aaPredicted RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 CALML3P27482 149 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 HTR1BP28222 390 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 CCND3P30281 292 aaPredicted RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 HOXA13P31271 388 aaPredicted RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 ALDH5A1P51649 535 aaPredicted RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 ARFIP2P53365 341 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 PIN1Q13526 163 aaPredicted RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 ARHGEF6Q15052 776 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 PWP2Q15269 919 aaKnown RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 UBE2SQ16763 222 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 RNASE12Q5GAN4 147 aaKnown RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 PRAMEF19Q5SWL8 479 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 PXDC1Q5TGL8 231 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 WDR78Q5VTH9 848 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 ARMCX2Q7L311 632 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 TECPR1Q7Z6L1 1165 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 DAAM2Q86T65 1068 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 DPP9Q86TI2 863 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 CCDC83Q8IWF9 413 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 SLC15A4Q8N697 577 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 RAET1EQ8TD07 263 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 SNX21Q969T3 373 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 ABHD8Q96I13 439 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 PRR25Q96S07 402 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 MMS19Q96T76 1030 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 LLPHQ9BRT6 129 aaKnown RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 RHOBTB2Q9BYZ6 727 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 SH3GLB2Q9NR46 395 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 PXMP2Q9NR77 195 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 VPS54Q9P1Q0 977 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 PNMA8BQ9ULN7 279 aaPredicted RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 NAP1L2Q9ULW6 460 aaPredicted RBP5.11□□□□□ -1.59
SMG1-206ENST00000562668 DOCK5Q9H7D0 1870 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 ALPK3Q96L96 1907 aa5.11□□□□□ -1.59
SMG1-206ENST00000562668 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 SMCO2A6NFE2 343 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 AP1G1O43747 822 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 POLR2MP0CAP2 368 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 CCL5P13501 91 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 NCLP19338 710 aaKnown RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 IBSPP21815 317 aaPredicted RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 MCM2P49736 904 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 PRKAG1P54619 331 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 NAPAP54920 295 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 TRAF1Q13077 416 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 LAMB3Q13751 1172 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 MLC1Q15049 377 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 PGM5Q15124 567 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 TRIP6Q15654 476 aaKnown RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 LY6KQ17RY6 165 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 SLC9C1Q4G0N8 1177 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 Q4G0T1 1027 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 EARS2Q5JPH6 523 aaKnown RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 UBE2Q1Q7Z7E8 422 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 CCAR1Q8IX12 1150 aaKnown RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 FAM177A1Q8N128 213 aaPredicted RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 OR6B3Q8NGW1 331 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 BPIFB1Q8TDL5 484 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 PIGOQ8TEQ8 1089 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 TMEM171Q8WVE6 324 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 RSPRY1Q96DX4 576 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 ZC3H10Q96K80 434 aaKnown RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 RMDN3Q96TC7 470 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 FAM118BQ9BPY3 351 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 DPH1Q9BZG8 443 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMG1-206ENST00000562668 PSTPIP2Q9H939 334 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 ORC3Q9UBD5 711 aaPredicted RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 SEC63Q9UGP8 760 aaKnown RBP5.1□□□□□ -1.59
SMG1-206ENST00000562668 NRBP1Q9UHY1 535 aa5.1□□□□□ -1.59
SMG1-206ENST00000562668 KCNJ14Q9UNX9 436 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms