RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 FGF10O15520 208 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SMAD6O43541 496 aaKnown RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 AKR1B10O60218 316 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SEMA4FO95754 770 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SLC8A1P32418 973 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 HOXD12P35452 270 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SERPINH1P50454 418 aaKnown RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 CLCN6P51797 869 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 GALCP54803 685 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 ARF5P84085 180 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SEMA3BQ13214 749 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 POLD3Q15054 466 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SLC18A3Q16572 532 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 CA9Q16790 459 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 PPP6R3Q5H9R7 873 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 ERMARDQ5T6L9 678 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 PEAR1Q5VY43 1037 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 USP30Q70CQ3 517 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 ARFGAP1Q8N6T3 406 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 RTL3Q8N8U3 475 aaKnown RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 CADM4Q8NFZ8 388 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 CTNNBL1Q8WYA6 563 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 ARHGEF2Q92974 986 aaKnown RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 ZNF419Q96HQ0 510 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 BTBD6Q96KE9 485 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 NCAPGQ9BPX3 1015 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 NUSAP1Q9BXS6 441 aaKnown RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 MIR1-1HGQ9H1L0 117 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 MAGEH1Q9H213 219 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 TNKS2Q9H2K2 1166 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 C6orf106Q9H6K1 298 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SGK2Q9HBY8 427 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 RXFP3Q9NSD7 469 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SERGEFQ9UGK8 458 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 HPCAL4Q9UM19 191 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 FARP1Q9Y4F1 1045 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-206ENST00000562610 DOCK9Q9BZ29 2069 aa16.49■□□□□ 0.23
COMMD4-206ENST00000562610 SSU72P8A0A1W2PR75 194 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 FAM47DPA6NHR8 397 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 AKR1B15C9JRZ8 316 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 C1QTNF3-AMACRE9PGA6 284 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 ALOX15BO15296 676 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 CYP1A2P05177 515 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 C7P10643 843 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 C5AR1P21730 350 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 SDHBP21912 280 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 MAOBP27338 520 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 RECQLP46063 649 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 SMTNL2Q2TAL5 461 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 POM121L1PQ3SYA9 428 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 RABEPKQ7Z6M1 372 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 HDDC3Q8N4P3 179 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 ZCCHC9Q8N567 271 aaKnown RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 AADATQ8N5Z0 425 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 ZNF564Q8TBZ8 553 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 KCTD15Q96SI1 283 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 ACE2Q9BYF1 805 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 ZWILCHQ9H900 591 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 CTTNBP2NLQ9P2B4 639 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 SUSD2Q9UGT4 822 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 IP6K2Q9UHH9 426 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 EVLQ9UI08 416 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-206ENST00000562610 FZD4Q9ULV1 537 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 NENFQ9UMX5 172 aa16.48■□□□□ 0.23
COMMD4-206ENST00000562610 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 DAPK3O43293 454 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 ZMPSTE24O75844 475 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 FSBPO95073 299 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 GNSP15586 552 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 GOT1P17174 413 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 HTR7P34969 479 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 PCK1P35558 622 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 SSR1P43307 286 aaKnown RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 METAP1P53582 386 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 GEMIN4P57678 1058 aaKnown RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 IRX4P78413 519 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 PIGHQ14442 188 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 ACAP1Q15027 740 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 DUOXA1Q1HG43 343 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 FAM46CQ5VWP2 391 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 LEKR1Q6ZMV7 388 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 CEP76Q8TAP6 659 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 PIP4K2CQ8TBX8 421 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 HSPH1Q92598 858 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 CCDC42Q96M95 316 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 CHP1Q99653 195 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 PCED1AQ9H1Q7 454 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 SPTLC3Q9NUV7 552 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 EIF2B4Q9UI10 523 aaKnown RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 FCF1Q9Y324 198 aaKnown RBP16.47■□□□□ 0.23
COMMD4-206ENST00000562610 ACTL7AQ9Y615 435 aa16.47■□□□□ 0.23
COMMD4-206ENST00000562610 CACNA1EQ15878 2313 aa16.46■□□□□ 0.23
COMMD4-206ENST00000562610 LAMA1P25391 3075 aa16.46■□□□□ 0.23
COMMD4-206ENST00000562610 METTL12A8MUP2 240 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms