RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SLC5A3P53794 718 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 RBP5P82980 135 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 ZRSR1Q15695 479 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 ZNF174Q15697 407 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 POM121L1PQ3SYA9 428 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 HP1BP3Q5SSJ5 553 aaPredicted RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 FYB2Q5VWT5 728 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3GQ6DHY5 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 CAPRIN2Q6IMN6 1127 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3CQ6IPX1 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 GUSBP11Q6P575 273 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 SLC39A4Q6P5W5 647 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 RAB11FIP2Q7L804 512 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 PRPF39Q86UA1 669 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 IQCHQ86VS3 1027 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 NT5DC4Q86YG4 428 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 FAM114A1Q8IWE2 563 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3Q8IZP1 549 aaPredicted RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 RBBP8NLQ8NC74 664 aaPredicted RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 DDI1Q8WTU0 396 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 KBTBD7Q8WVZ9 684 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 DUSP23Q9BVJ7 150 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 SNX25Q9H3E2 840 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 ZFYVE1Q9HBF4 777 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 EPB41L5Q9HCM4 733 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TLR8Q9NR97 1041 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 RAD18Q9NS91 495 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 SUN2Q9UH99 717 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 ACSL6Q9UKU0 697 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TPX2Q9ULW0 747 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 CLEC4EQ9ULY5 219 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 U3KQA8 63 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 CKAP5Q14008 2032 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 LRRK1Q38SD2 2015 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 SDK2Q58EX2 2172 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TCHHQ07283 1943 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 TISP43B9A030 160 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ANKRD63C9JTQ0 380 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 SCAMP1O15126 338 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 MDM4O15151 490 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 NVLO15381 856 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 DIAPH2O60879 1101 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 PIAS2O75928 621 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 NEBLO76041 1014 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 CLDN1O95832 211 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 DLGAP3O95886 979 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 TGFB1P01137 390 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 PRKCGP05129 697 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ATP5BP06576 529 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 ZDHHC11BP0C7U3 371 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 GIMD1P0DJR0 217 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 RARGP13631 454 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 HGFP14210 728 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 PTPN1P18031 435 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 WARSP23381 471 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 PSMA5P28066 241 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 GNL1P36915 607 aaPredicted RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 PGFP49763 221 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ADPRHP54922 357 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 NCKAP1LP55160 1127 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 PPP2CBP62714 309 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 PPP2CAP67775 309 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 KLRB1Q12918 225 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 EIF3IQ13347 325 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 TOB2Q14106 344 aaPredicted RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 SPIDRQ14159 915 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 NFKBIBQ15653 356 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 CST6Q15828 149 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 LACTB2Q53H82 288 aaPredicted RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 C10orf120Q5SQS8 335 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ERICH6BQ5W0A0 696 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 KRT79Q5XKE5 535 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 SCARA3Q6AZY7 606 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 SLFN12LQ6IEE8 588 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 CHST9Q7L1S5 443 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 RSRC2Q7L4I2 434 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 DPH6Q7L8W6 267 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ZFAND4Q86XD8 727 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 MMAAQ8IVH4 418 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 DIS3L2Q8IYB7 885 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 TEX19Q8NA77 164 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 OR6B3Q8NGW1 331 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 GIMAP7Q8NHV1 300 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 JPH3Q8WXH2 748 aaPredicted RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 WASF1Q92558 559 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ZNF274Q96GC6 653 aaPredicted RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 FAM84AQ96KN4 292 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 KCNK16Q96T55 309 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 MED10Q9BTT4 135 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 YIPF2Q9BWQ6 316 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 RBCK1Q9BYM8 510 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 SLC2A11Q9BYW1 496 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 STRADBQ9C0K7 418 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 RSPH9Q9H1X1 276 aaPredicted RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 MTG2Q9H4K7 406 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 CASS4Q9NQ75 786 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 KLHL11Q9NVR0 708 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 PPP4R2Q9NY27 417 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 DONSONQ9NYP3 566 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 NCKIPSDQ9NZQ3 722 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms