RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PABPC3Q9H361 631 aaKnown RBP20.35■□□□□ 0.85
TSPAN3-210ENST00000561277 NOL6Q9H6R4 1146 aaKnown RBP20.35■□□□□ 0.85
TSPAN3-210ENST00000561277 HPCAL4Q9UM19 191 aa20.35■□□□□ 0.85
TSPAN3-210ENST00000561277 LAMA1P25391 3075 aa20.35■□□□□ 0.85
TSPAN3-210ENST00000561277 RALGAPA1Q6GYQ0 2036 aa20.35■□□□□ 0.85
TSPAN3-210ENST00000561277 TMEM110-MUSTN1A8MSY1 372 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 WASH4PA8MWX3 477 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 LRP3O75074 770 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 RARAP10276 462 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 ITPKAP23677 461 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SLC8A1P32418 973 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 GJC1P36383 396 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SLC25A11Q02978 314 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 ZNF33AQ06730 810 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SPDYCQ5MJ68 293 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SLC41A1Q8IVJ1 513 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 HMCESQ96FZ2 354 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 FBXL12Q9NXK8 326 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SERGEFQ9UGK8 458 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 FCF1Q9Y324 198 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 A0A1W2PP55 124 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 RNASEH2AO75792 299 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 PROSCO94903 275 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 ERCC2P18074 760 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 ACSL1P33121 698 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SF3A2Q15428 464 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 CSRP2Q16527 193 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 BOLA3Q53S33 107 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 DSG4Q86SJ6 1040 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 GPR161Q8N6U8 529 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SLC35G2Q8TBE7 412 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 CELF6Q96J87 481 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 CCDC114Q96M63 670 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 PANX2Q96RD6 677 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 BTBD1Q9H0C5 482 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 CWC15Q9P013 229 aaKnown RBP20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 SCML1Q9UN30 329 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 NCKAP1Q9Y2A7 1128 aa20.34■□□□□ 0.85
TSPAN3-210ENST00000561277 CHD5Q8TDI0 1954 aa20.33■□□□□ 0.85
TSPAN3-210ENST00000561277 CEP192Q8TEP8 1941 aa20.33■□□□□ 0.85
TSPAN3-210ENST00000561277 RASA4BC9J798 803 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 RASA4O43374 803 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 ADH1BP00325 375 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 C7P10643 843 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 ARL4AP40617 200 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 DNA2P51530 1060 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 METAP1P53582 386 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 SLC20A2Q08357 652 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 MESDQ14696 234 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 DPYSL2Q16555 572 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 HADHQ16836 314 aaKnown RBP20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 POM121L1PQ3SYA9 428 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 PLA2G2CQ5R387 149 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 TCEAL6Q6IPX3 200 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 PRR23CQ6ZRP0 262 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 UMODL1-AS1Q8N2C9 162 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 TCEAL3Q969E4 200 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 OMDQ99983 421 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 KLC2Q9H0B6 622 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 VPS45Q9NRW7 570 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 DONSONQ9NYP3 566 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 FARP1Q9Y4F1 1045 aaPredicted RBP20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 NUP205Q92621 2012 aa20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 TNRC6BQ9UPQ9 1833 aaKnown RBP20.33■□□□□ 0.84
TSPAN3-210ENST00000561277 MEI4A8MW99 385 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 H3BRJ5 948 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 BUB1O43683 1085 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 KDELR3O43731 214 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 RECQLP46063 649 aaPredicted RBP20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 YBEYP58557 167 aaPredicted RBP20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 PARP15Q460N3 678 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 RHOT2Q8IXI1 618 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 RGL4Q8IZJ4 473 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 HDDC3Q8N4P3 179 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 AADATQ8N5Z0 425 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 C12orf50Q8NA57 414 aaPredicted RBP20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 SPC24Q8NBT2 197 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 NETO2Q8NC67 525 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 OR2A12Q8NGT7 310 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 TEKT4Q8WW24 435 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 RFFLQ8WZ73 363 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 FOXJ1Q92949 421 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 TM6SF2Q9BZW4 377 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 CEP44Q9C0F1 390 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 TMEM74BQ9NUR3 256 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 SARDHQ9UL12 918 aa20.32■□□□□ 0.84
TSPAN3-210ENST00000561277 NUMA1Q14980 2115 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 FAM47DPA6NHR8 397 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 SOWAHDA6NJG2 315 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 MCF2LO15068 1137 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 ALOX15BO15296 676 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 CD160O95971 181 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 ZNF806P0C7X5 589 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 C5AR1P21730 350 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 CYLC1P35663 651 aaPredicted RBP20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 ZNF135P52742 658 aaPredicted RBP20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 GEMIN4P57678 1058 aaKnown RBP20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 KRT81Q14533 505 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 USP30Q70CQ3 517 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms