RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 TOX4O94842 621 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HEXIM1O94992 359 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 TRIM16O95361 564 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 MOCS3O95396 460 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ADCY5O95622 1261 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 OLFM2O95897 454 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TRUB2O95900 331 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 RLN1P04808 185 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ITGB1P05556 798 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ENO1P06733 434 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 GALTP07902 379 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CHRM4P08173 479 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ZGLP1P0C6A0 271 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SPATA31D3P0C874 917 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CTAGE8P0CG41 777 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TSPY4P0CV99 314 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TSPY10P0CW01 314 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SPATA31C1P0DKV0 1188 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 VSIG10L2P0DP72 767 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 VPREB1P12018 145 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ACTN1P12814 892 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ACP5P13686 325 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ALADP13716 330 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SELLP14151 372 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SNRPBP14678 240 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 PTPN2P17706 415 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 KCNA3P22001 575 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 FGFR4P22455 802 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 AVPR2P30518 371 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HOXA11P31270 313 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 ICAM3P32942 547 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 MC5RP33032 325 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CIITAP33076 1130 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PCGF2P35227 344 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ADMP35318 185 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HNF1BP35680 557 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 IGHMBP2P38935 993 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 CASP3P42574 277 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ASMTP46597 345 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CCR3P51677 355 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RRADP55042 308 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NME5P56597 212 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PRKCEQ02156 737 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CEBPZQ03701 1054 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 PRKCQQ04759 706 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CDK18Q07002 472 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TUBB3Q13509 450 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ITGA7Q13683 1181 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 BYSLQ13895 437 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 CAPSQ13938 189 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 KCNC3Q14003 757 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CLCA4Q14CN2 919 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SNAPC1Q16533 368 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 IMMTQ16891 758 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 AAK1Q2M2I8 961 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TYSND1Q2T9J0 566 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TWISTNBQ3B726 338 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 KBTBD12Q3ZCT8 623 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CEP55Q53EZ4 464 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 IFI44LQ53G44 452 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 FBLN7Q53RD9 439 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 MDH1BQ5I0G3 518 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RALGPS1Q5JS13 557 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RNFT1Q5M7Z0 435 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SPDYAQ5MJ70 313 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 C6orf163Q5TEZ5 329 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 DENND2CQ68D51 928 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TMEM200BQ69YZ2 307 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HEPHL1Q6MZM0 1159 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RGS7BPQ6MZT1 257 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 MSANTD2Q6P1R3 559 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CASC4Q6P4E1 433 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TMEM88Q6PEY1 159 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TMEM270Q6UE05 265 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 AFTPHQ6ULP2 937 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TMEM108Q6UXF1 575 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SERPINA13PQ6UXR4 307 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 GBP6Q6ZN66 633 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RBM43Q6ZSC3 357 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 SPATA31D4Q6ZUB0 917 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 KCTD9Q7L273 389 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 LPCAT2Q7L5N7 544 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RABEPKQ7Z6M1 372 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TAF8Q7Z7C8 310 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 RALYLQ86SE5 291 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 PHLDB2Q86SQ0 1253 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CLEC14AQ86T13 490 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CTAGE6Q86UF2 777 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 GPAT4Q86UL3 456 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TMEM200AQ86VY9 491 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NBPF5PQ86XG9 351 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 ZNF280BQ86YH2 543 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CTAGE4Q8IX94 777 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ZDHHC14Q8IZN3 488 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 LILRA2Q8N149 483 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ARMC10Q8N2F6 343 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TC2NQ8N9U0 490 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD53Q8N9V6 530 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PDPRQ8NCN5 879 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PSD4Q8NDX1 1056 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms