RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 MAGEB5Q9BZ81 275 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 CBX8Q9HC52 389 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 ADAM22Q9P0K1 906 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 PPM1HQ9ULR3 514 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 BTBD3Q9Y2F9 522 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 LRRC72A6NJI9 287 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 H0Y8X5 98 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 RTN2O75298 545 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 UBASH3AP57075 661 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 NR1I3Q14994 352 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 TRIP6Q15654 476 aaKnown RBP16.35■□□□□ 0.21
LMX1B-204ENST00000561065 CLEC16AQ2KHT3 1053 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 ARL13BQ3SXY8 428 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 UNQ6494/PRO21346Q6UXR6 183 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 DBX2Q6ZNG2 339 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 MON1BQ7L1V2 547 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 SETD3Q86TU7 594 aaPredicted RBP16.35■□□□□ 0.21
LMX1B-204ENST00000561065 OR14C36Q8NHC7 312 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 PIP4K2CQ8TBX8 421 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 HAPLN3Q96S86 360 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 NDFIP2Q9NV92 336 aa16.35■□□□□ 0.21
LMX1B-204ENST00000561065 BZW2Q9Y6E2 419 aaKnown RBP16.35■□□□□ 0.21
LMX1B-204ENST00000561065 A0A1W2PR77 199 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 TCRBV5S1A1TA0A578 114 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 FAM72CH0Y354 149 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 MCF2LO15068 1137 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 ALOX15BO15296 676 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 TEX33O43247 280 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 LATO43561 262 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 PLRG1O43660 514 aaKnown RBP16.34■□□□□ 0.21
LMX1B-204ENST00000561065 BNIP3LO60238 219 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 SRGAP2O75044 1071 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 ZMPSTE24O75844 475 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 FTH1P19P0C7X4 201 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 CCR5P51681 352 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 HDAC4P56524 1084 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 TAS2R38P59533 333 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 RACK1P63244 317 aaKnown RBP16.34■□□□□ 0.21
LMX1B-204ENST00000561065 FANCCQ00597 558 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 IL9RQ01113 521 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 CNTN1Q12860 1018 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 TEAD4Q15561 434 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 ZNF423Q2M1K9 1284 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 FIGNQ5HY92 759 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 FAM72AQ5TYM5 149 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 SFMBT2Q5VUG0 894 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 FAM72DQ6L9T8 149 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 C22orf39Q6P5X5 142 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-204ENST00000561065 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 FAM72BQ86X60 149 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 PHF13Q86YI8 300 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-204ENST00000561065 CHCHD4Q8N4Q1 142 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 CCDC185Q8N715 623 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 CHST14Q8NCH0 376 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 OR2A12Q8NGT7 310 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 VCPIP1Q96JH7 1222 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 C2orf49Q9BVC5 232 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-204ENST00000561065 TOR4AQ9NXH8 423 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 ACTL7AQ9Y615 435 aa16.34■□□□□ 0.21
LMX1B-204ENST00000561065 VILLO15195 856 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 CBFA2T2O43439 604 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 ZNF821O75541 412 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-204ENST00000561065 KRT3P12035 628 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 OR1E1P30953 314 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 SDC4P31431 198 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 RFC1P35251 1148 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-204ENST00000561065 PTPN9P43378 593 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 ARF5P84085 180 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
LMX1B-204ENST00000561065 ASIC2Q16515 512 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 C6orf118Q5T5N4 469 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 PIP5KL1Q5T9C9 394 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 RAB44Q7Z6P3 723 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-204ENST00000561065 GLRX5Q86SX6 157 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 LUZP1Q86V48 1076 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 NLRP14Q86W24 1093 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 DRC7Q8IY82 874 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 PNPLA1Q8N8W4 532 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 ATP11CQ8NB49 1132 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 SETD7Q8WTS6 366 aaKnown RBP16.33■□□□□ 0.2
LMX1B-204ENST00000561065 CENPIQ92674 756 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-204ENST00000561065 ARRDC3Q96B67 414 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 SELENOOQ9BVL4 669 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 ZYG11BQ9C0D3 744 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 TNKS2Q9H2K2 1166 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 ARHGAP20Q9P2F6 1191 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 NEUROG3Q9Y4Z2 214 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 PCDHGB2Q9Y5G2 931 aa16.33■□□□□ 0.2
LMX1B-204ENST00000561065 COL5A1P20908 1838 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-204ENST00000561065 DMXL2Q8TDJ6 3036 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 ILVBLA1L0T0 632 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 FLRT2O43155 660 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 SLC7A4O43246 635 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 CD160O95971 181 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 PROS1P07225 676 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms