RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RSPH9Q9H1X1 276 aaPredicted RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 NDFIP2Q9NV92 336 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 ASF1BQ9NVP2 202 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 ARHGAP20Q9P2F6 1191 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 KLHL42Q9P2K6 505 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 PCDHA12Q9UN75 941 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 PLA2G4CQ9UP65 541 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 CA5BQ9Y2D0 317 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 ZNF281Q9Y2X9 895 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 CSNK1G3Q9Y6M4 447 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 CYP3A7-CYP3A51PA0A087WV96 503 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 FIGNL2A6NMB9 653 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 K7ERI5 159 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 MID1O15344 667 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 RNASEH1O60930 286 aaKnown RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 ATE1O95260 518 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 BPNT1O95861 308 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 CXCL8P10145 99 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 CYP3A7P24462 503 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 ADSLP30566 484 aaPredicted RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 MAT2AP31153 395 aaKnown RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 MAGEA11P43364 429 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 RECQLP46063 649 aaPredicted RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 MEOX1P50221 254 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 ADPRHP54922 357 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 ITGA1P56199 1179 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 CCL7P80098 99 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 AMPD3Q01432 767 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 ZFP36L1Q07352 338 aaKnown RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 TAF10Q12962 218 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 PTK2BQ14289 1009 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 PPP2R5AQ15172 486 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 HIST2H2BDQ6DRA6 164 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 NCAPH2Q6IBW4 605 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 LSRQ86X29 649 aaPredicted RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 MICU3Q86XE3 530 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 SLC35F3Q8IY50 421 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 UNC5BQ8IZJ1 945 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 SDR16C5Q8N3Y7 309 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 OR6B3Q8NGW1 331 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 DNAJB8Q8NHS0 232 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 BICD2Q8TD16 824 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 TBCKQ8TEA7 893 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 CCDC12Q8WUD4 166 aaPredicted RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 PIWIL1Q96J94 861 aaKnown RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 TAAR9Q96RI9 348 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 BOCQ9BWV1 1114 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 CPEB1Q9BZB8 566 aaKnown RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 PLEKHA5Q9HAU0 1116 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 AKAP7Q9P0M2 348 aaPredicted RBP6.69□□□□□ -1.34
HERC1-208ENST00000560462 ADAM21Q9UKJ8 722 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 GTF3C4Q9UKN8 822 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 PADI4Q9UM07 663 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 OSGIN2Q9Y236 505 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 POLHQ9Y253 713 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 PCDHGA3Q9Y5H0 932 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 SLC12A7Q9Y666 1083 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 RP1P56715 2156 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 POLEQ07864 2286 aa6.69□□□□□ -1.34
HERC1-208ENST00000560462 ANK2Q01484 3957 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 LOC101059948A0A1B0GTJ6 334 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 A0A1W2PQM1 296 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 TTC26A0AVF1 554 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 ZSCAN5CA6NGD5 496 aaPredicted RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 TPP1O14773 563 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 AQP9O43315 295 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 DNAJB5O75953 348 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 SLITRK3O94933 977 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 LYPLA2O95372 231 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 B3GALT4O96024 378 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 AVPP01185 164 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 THBS1P07996 1170 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 CCL4P13236 92 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 SDSP20132 328 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 ANXA13P27216 316 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 IST1P53990 364 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 NOP14P78316 857 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 SQSTM1Q13501 440 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 CST6Q15828 149 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 HECTD3Q5T447 861 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 PHF19Q5T6S3 580 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 C9orf57Q5W0N0 161 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 FBXW10Q5XX13 1052 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 TMEM215Q68D42 235 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 SLC6A19Q695T7 634 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 CASC1Q6TDU7 716 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 CWC27Q6UX04 472 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 ZNF517Q6ZMY9 492 aaPredicted RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 FJX1Q86VR8 437 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 IQCKQ8N0W5 287 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 PNPLA2Q96AD5 504 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 PLD4Q96BZ4 506 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 ACBD6Q9BR61 282 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 SLC25A23Q9BV35 468 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 MRPL4Q9BYD3 311 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 NACA2Q9H009 215 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 DCTPP1Q9H773 170 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms