RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TNKS2Q9H2K2 1166 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 TSPY26PQ9H489 355 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 NOL6Q9H6R4 1146 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 SGK2Q9HBY8 427 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 ATP13A1Q9HD20 1204 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 TMEM248Q9NWD8 314 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 CNOT8Q9UFF9 292 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 ADAMTS1Q9UHI8 967 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 FZD10Q9ULW2 581 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 SCML1Q9UN30 329 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 NCKAP1Q9Y2A7 1128 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 CABIN1Q9Y6J0 2220 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 GIPC1O14908 333 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 MCF2LO15068 1137 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 BCAT2O15382 392 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 CREB3O43889 395 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 CD160O95971 181 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 ADH1BP00325 375 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 GOT1P17174 413 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 PSMA2P25787 234 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 CASP14P31944 242 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 L1CAMP32004 1257 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 GRIK2Q13002 908 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 SEMA3BQ13214 749 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 NFKBIBQ15653 356 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 CA9Q16790 459 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 EFHC2Q5JST6 749 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 DAB2IPQ5VWQ8 1189 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 KIAA0895LQ68EN5 471 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 LAYNQ6UX15 382 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 ZNF783Q6ZMS7 281 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 LEKR1Q6ZMV7 388 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 MINDY1Q8N5J2 469 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 PIP4K2CQ8TBX8 421 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 OR8D1Q8WZ84 308 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 SYN2Q92777 582 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 ARHGEF2Q92974 986 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 ACE2Q9BYF1 805 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 KLC2Q9H0B6 622 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 ISCUQ9H1K1 167 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 EBF2Q9HAK2 575 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 MYO1AQ9UBC5 1043 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 SUSD2Q9UGT4 822 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 PPM1HQ9ULR3 514 aa11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 LUC7L2Q9Y383 392 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-216ENST00000560243 A0A087X0T9 212 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 A0A1B0GTW7 788 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 C10orf142B7Z368 130 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 SERPING1P05155 500 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 FAM228BP0C875 321 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 GNSP15586 552 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 EPHB2P29323 1055 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 MAPKAPK2P49137 400 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 CSNK1EP49674 416 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 SERPINH1P50454 418 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 ADPRHP54922 357 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 CNTN1Q12860 1018 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 PPP1R2P3Q6NXS1 205 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 C22orf39Q6P5X5 142 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 CYP4V2Q6ZWL3 525 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 RABEPKQ7Z6M1 372 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 RTL3Q8N8U3 475 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 OR14C36Q8NHC7 312 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 TMEM131Q92545 1883 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 IL21RQ9HBE5 538 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 TM9SF3Q9HD45 589 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 ARHGAP20Q9P2F6 1191 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 PCSK1NQ9UHG2 260 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 FZD4Q9ULV1 537 aa11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 FCF1Q9Y324 198 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-216ENST00000560243 ACACBO00763 2458 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 A0A1B0GVT2 93 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 WNT9AO14904 365 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 ALOX15BO15296 676 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 RAMP2O60895 175 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 KCNK5O95279 499 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 TCF4P15884 667 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 CD27P26842 260 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 MIPP30301 263 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 CHRNA3P32297 505 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 DNA2P51530 1060 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 CLCN6P51797 869 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 ATXN3P54252 364 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 PPP2CBP62714 309 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 PPP2CAP67775 309 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 FOXK2Q01167 660 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 ARSIQ5FYB1 569 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 KCNT1Q5JUK3 1230 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 AGBL4Q5VU57 503 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 PSAPL1Q6NUJ1 521 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 RETSATQ6NUM9 610 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 DPY19L3Q6ZPD9 716 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 DSG4Q86SJ6 1040 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms