RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SCINQ9Y6U3 715 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 DOCK9Q9BZ29 2069 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SPTBN2O15020 2390 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 A0A1B0GTW7 788 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 K7ERQ8 282 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-213ENST00000560175 CBFA2T2O43439 604 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 IGHV4-34P06331 123 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 ENGP17813 658 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 GLDCP23378 1020 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 MAOBP27338 520 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 NUMBP49757 651 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 YBEYP58557 167 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-213ENST00000560175 EFHC2Q5JST6 749 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 ERMARDQ5T6L9 678 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 RETSATQ6NUM9 610 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 SCYL2Q6P3W7 929 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 DGLUCYQ7Z3D6 616 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 FAM124AQ86V42 546 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 CACUL1Q86Y37 369 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 VSTM4Q8IW00 320 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 UMODL1-AS1Q8N2C9 162 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 RTL3Q8N8U3 475 aaKnown RBP13.51□□□□□ -0.25
SMAD3-213ENST00000560175 TMIEQ8NEW7 156 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 OR8D1Q8WZ84 308 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 VOPP1Q96AW1 172 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 BIRC7Q96CA5 298 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 TMEM9BQ9NQ34 198 aa13.51□□□□□ -0.25
SMAD3-213ENST00000560175 TPX2Q9ULW0 747 aaKnown RBP13.51□□□□□ -0.25
SMAD3-213ENST00000560175 CABIN1Q9Y6J0 2220 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ATXN2Q99700 1313 aaKnown RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 A0A1W2PP55 124 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 DCDC2BA2VCK2 349 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 C4orf47A7E2U8 309 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 UPK3BL1B0FP48 263 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 UPK3BL2E5RIL1 263 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ARHGAP33O14559 1287 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 SLC7A4O43246 635 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 LRCH4O75427 683 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 GJB3O75712 270 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 CYP1A2P05177 515 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 CTSLP07711 333 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 GNSP15586 552 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 PSMA2P25787 234 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 PCK1P35558 622 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ACVRL1P37023 503 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 HCAR3P49019 387 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 SERPINH1P50454 418 aaKnown RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 CCR5P51681 352 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 TRIM14Q14142 442 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ACCSLQ4AC99 568 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 TDRD12Q587J7 1177 aaKnown RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 FAM46CQ5VWP2 391 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 RWDD4Q6NW29 188 aaKnown RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 SARM1Q6SZW1 724 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 Q6ZVU0 165 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 DSG4Q86SJ6 1040 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 VPS36Q86VN1 386 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 RGL4Q8IZJ4 473 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 HDDC3Q8N4P3 179 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 NIPA2Q8N8Q9 360 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ATP11CQ8NB49 1132 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 OR8K1Q8NGG5 319 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 OR2T34Q8NGX1 318 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ZNF653Q96CK0 615 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 PEBP4Q96S96 227 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 ATP13A1Q9HD20 1204 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 DNAAF2Q9NVR5 837 aaKnown RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 EIF2B4Q9UI10 523 aaKnown RBP13.5□□□□□ -0.25
SMAD3-213ENST00000560175 DNAI1Q9UI46 699 aa13.5□□□□□ -0.25
SMAD3-213ENST00000560175 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 SSU72P8A0A1W2PR75 194 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 CBX4O00257 560 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-213ENST00000560175 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-213ENST00000560175 LATO43561 262 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 KDELR3O43731 214 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 RNF8O76064 485 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 IL1BP01584 269 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 SYPP08247 313 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 DESP17661 470 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 CD27P26842 260 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 EPHB2P29323 1055 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 MIPP30301 263 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 ZNF135P52742 658 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-213ENST00000560175 METAP1P53582 386 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 BNC1Q01954 994 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 GFPT1Q06210 699 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-213ENST00000560175 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-213ENST00000560175 POLD3Q15054 466 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-213ENST00000560175 KIAA0895LQ68EN5 471 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 C22orf39Q6P5X5 142 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 LINGO4Q6UY18 593 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 PCDH20Q8N6Y1 951 aaKnown RBP13.49□□□□□ -0.25
SMAD3-213ENST00000560175 PIP4K2CQ8TBX8 421 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 EPAS1Q99814 870 aa13.49□□□□□ -0.25
SMAD3-213ENST00000560175 OMDQ99983 421 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms