RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 SYKP43405 635 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 HNRNPKP61978 463 aaKnown RBP eCLIP20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 CLN3Q13286 438 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 PKP1Q13835 747 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 FZD2Q14332 565 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 TMEM259Q4ZIN3 620 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 ZCCHC8Q6NZY4 707 aaKnown RBP20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 FBXL22Q6P050 247 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 CCDC81Q6ZN84 652 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 Q6ZSR6 202 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 CLEC14AQ86T13 490 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 DCP2Q8IU60 420 aaKnown RBP20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 FAM174AQ8TBP5 190 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 KAT5Q92993 513 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 ARRDC3Q96B67 414 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 DNAJC28Q9NX36 388 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 IL17BQ9UHF5 180 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 HS3ST3A1Q9Y663 406 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 CSNK1G3Q9Y6M4 447 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 FLNCQ14315 2725 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 IRAK1P51617 712 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 GUSBP11Q6P575 273 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 ATP6V0D2Q8N8Y2 350 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 ZNF548Q8NEK5 533 aaPredicted RBP20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 TMIEQ8NEW7 156 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 OR2A12Q8NGT7 310 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 PPP1R9BQ96SB3 815 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 SLC4A5Q9BY07 1137 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 POPDC2Q9HBU9 364 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 EVA1BQ9NVM1 165 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 KLF15Q9UIH9 416 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 HS3ST2Q9Y278 367 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 KIF26BQ2KJY2 2108 aa20.27■□□□□ 0.84
RABGGTA-214ENST00000560163 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 EME2A4GXA9 379 aaPredicted RBP20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 MT-CO1P00395 513 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 CSF2P04141 144 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 SRCP12931 536 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 CHRNA3P32297 505 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 YWHAZP63104 245 aaKnown RBP20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 ZNF177Q13360 481 aaPredicted RBP20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 CDKN3Q16667 212 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 RABGAP1LQ5R372 815 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 SEL1L3Q68CR1 1132 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 KRBA2Q6ZNG9 492 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 LMO3Q8TAP4 145 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 STK32AQ8WU08 396 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 TRIM62Q9BVG3 475 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 ST7Q9NRC1 585 aa20.26■□□□□ 0.83
RABGGTA-214ENST00000560163 SPTY2D1-AS1A0A0U1RR47 76 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 POM121BA6NF01 834 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 A6NNZ2 444 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 RIOK3O14730 519 aaKnown RBP20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 PMM2O15305 246 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 NME1P15531 152 aaKnown RBP20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 MLLT3P42568 568 aaPredicted RBP20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 ACADSBP45954 432 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 CENPCQ03188 943 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 CCDC15Q0P6D6 951 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 FGL2Q14314 439 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 LINC00303Q3SY05 128 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 OR6B2Q6IFH4 312 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 RBM44Q6ZP01 1051 aaKnown RBP20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 EFL1Q7Z2Z2 1120 aaKnown RBP20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 PRICKLE2Q7Z3G6 844 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 TMEM110Q86TL2 294 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 TPCN2Q8NHX9 752 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 HDAC8Q9BY41 377 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 NCKIPSDQ9NZQ3 722 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 SLC12A6Q9UHW9 1150 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 SALL4Q9UJQ4 1053 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 TBC1D30Q9Y2I9 924 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 RP1P56715 2156 aa20.25■□□□□ 0.83
RABGGTA-214ENST00000560163 CPED1A4D0V7 1026 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 KPNA3O00505 521 aaPredicted RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 TERTO14746 1132 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 CASC3O15234 703 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 BNIP3LO60238 219 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 TCEA3O75764 348 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 PRCPP42785 496 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 FMO5P49326 533 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 PDX1P52945 283 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 PMS1P54277 932 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 FKBP3Q00688 224 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 AUHQ13825 339 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 TAF5Q15542 800 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 C5orf22Q49AR2 442 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 ANKRD40Q6AI12 368 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 KYAT3Q6YP21 454 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 ERN2Q76MJ5 926 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 PPM1KQ8N3J5 372 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 ARL14Q8N4G2 192 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 RPRD1AQ96P16 312 aaPredicted RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 NT5C1BQ96P26 610 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 CCNL2Q96S94 520 aaPredicted RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 PSMB7Q99436 277 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 THAP9Q9H5L6 903 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 ARMCX3Q9UH62 379 aaPredicted RBP20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 VPS28Q9UK41 221 aa20.24■□□□□ 0.83
RABGGTA-214ENST00000560163 TRPM6Q9BX84 2022 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms