RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CIR1Q86X95 450 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 FBXL13Q8NEE6 735 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 SLC35F5Q8WV83 523 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 BMFQ96LC9 184 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 SERPINB11Q96P15 392 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 RAB20Q9NX57 234 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 KLF15Q9UIH9 416 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 ZFR2Q9UPR6 939 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 CSNK1G3Q9Y6M4 447 aa13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 SPENQ96T58 3664 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-213ENST00000560127 RNF103O00237 685 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 MUSKO15146 869 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 CTSLP07711 333 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 VDRP11473 427 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 SFTPCP11686 197 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 ZNF18P17022 549 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 SLC5A2P31639 672 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 MXI1P50539 228 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 NR0B2Q15466 257 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 DLG2Q15700 870 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 DEFB133Q30KQ1 61 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 FOXD4L6Q3SYB3 417 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 SEL1L3Q68CR1 1132 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 CXorf57Q6NSI4 855 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 FOXD4L3Q6VB84 417 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 PTAR1Q7Z6K3 402 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 CHSY1Q86X52 802 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 DCP2Q8IU60 420 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 TFAP2BQ92481 460 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 ALG14Q96F25 216 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 NCKIPSDQ9NZQ3 722 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 SALL4Q9UJQ4 1053 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 NAALADL1Q9UQQ1 740 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 PCDHGA7Q9Y5G6 932 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
RABGGTA-213ENST00000560127 PRRC2CQ9Y520 2896 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 LRBAP50851 2863 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 SPTY2D1-AS1A0A0U1RR47 76 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 POM121BA6NF01 834 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 A6NNZ2 444 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 AQP9O43315 295 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 YEATS4O95619 227 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 HSP90AA1P07900 732 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 CR2P20023 1033 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 PSMC2P35998 433 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 INHBCP55103 352 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 CUL2Q13617 745 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 FGL2Q14314 439 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 TBR1Q16650 682 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 TMEM259Q4ZIN3 620 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 ZC3H12AQ5D1E8 599 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 LCLAT1Q6UWP7 414 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 OR52K2Q8NGK3 314 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 PAGE5Q96GU1 130 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 LIN37Q96GY3 246 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 ZSWIM1Q9BR11 485 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 BOCQ9BWV1 1114 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 SEPT3Q9UH03 358 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 SERTAD1Q9UHV2 236 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 ACSL6Q9UKU0 697 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 CHD5Q8TDI0 1954 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 CRYBG3Q68DQ2 2970 aa13.14□□□□□ -0.31
RABGGTA-213ENST00000560127 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 NTN3O00634 580 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 TPP1O14773 563 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 PLD2O14939 933 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 RAD51BO15315 384 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 BNIP3LO60238 219 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 PPFIA2O75334 1257 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 PCDH8O95206 1070 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 JUNDP17535 347 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 UGT1A5P35504 534 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 DNM1Q05193 864 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 SPIDRQ14159 915 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 TPRG1LQ5T0D9 272 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 RESP18Q5W5W9 173 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 CLEC18BQ6UXF7 455 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 KYAT3Q6YP21 454 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 B3GNT8Q7Z7M8 397 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 C14orf80Q86SX3 495 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 PARGQ86W56 976 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 SLC35F3Q8IY50 421 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 FBXO39Q8N4B4 442 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 UBR7Q8N806 425 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 LMX1AQ8TE12 382 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 IL12RB2Q99665 862 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 PRMT1Q99873 361 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 CCDC3Q9BQI4 270 aa13.13□□□□□ -0.31
RABGGTA-213ENST00000560127 FEM1AQ9BSK4 669 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms