RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 DEAF1O75398 565 aaPredicted RBP19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 GPD2P43304 727 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 QARSP47897 775 aaKnown RBP19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 TNFAIP1Q13829 316 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 HERC3Q15034 1050 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 QRICH1Q2TAL8 776 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 CEP55Q53EZ4 464 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 ZCCHC7Q8N3Z6 543 aaKnown RBP19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 HTRA1Q92743 480 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 VPS33AQ96AX1 596 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 TCAF1Q9Y4C2 921 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 TESMINQ9Y4I5 508 aa19.47■□□□□ 0.71
SEMA4B-215ENST00000560089 VWA5AO00534 786 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 SOCS2O14508 198 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 NADKO95544 446 aaPredicted RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 POLR2CP19387 275 aaPredicted RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 RACK1P63244 317 aaKnown RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 SNAP47Q5SQN1 464 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 MBLAC2Q68D91 279 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 AGMOQ6ZNB7 445 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 KIAA0408Q6ZU52 694 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 CHST15Q7LFX5 561 aaPredicted RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 OTOP3Q7RTS5 596 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 PPWD1Q96BP3 646 aaKnown RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 CPNE5Q9HCH3 593 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 UGT2A1Q9Y4X1 527 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 COL2A1P02458 1487 aaPredicted RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 RFPL2O75678 378 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 TMEM63AO94886 807 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 TOP3BO95985 862 aaKnown RBP19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 NME5P56597 212 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 C19orf57Q0VDD7 668 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 STILQ15468 1287 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 DLG2Q15700 870 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 C2CD6Q53TS8 623 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 PARP8Q8N3A8 854 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 SNX31Q8N9S9 440 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 RCN3Q96D15 328 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 CDHR1Q96JP9 859 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 MBOAT7Q96N66 472 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 WDR41Q9HAD4 459 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 ENPP5Q9UJA9 477 aa19.46■□□□□ 0.71
SEMA4B-215ENST00000560089 PNMA6FA0A0J9YX94 578 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 MFN2O95140 757 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 ITGAVP06756 1048 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 NAGAP17050 411 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 IL4RP24394 825 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 PIK3R1P27986 724 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 LEPRP48357 1165 aaKnown RBP19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 GALK2Q01415 458 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 NIPAL4Q0D2K0 466 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 RINT1Q6NUQ1 792 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 PGAM4Q8N0Y7 254 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 DCLK2Q8N568 766 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 ZFP90Q8TF47 636 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 MAP6Q96JE9 813 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 AIFM2Q9BRQ8 373 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 RAB20Q9NX57 234 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 SBF1O95248 1867 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 ZBTB5O15062 677 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 B4GALT4O60513 344 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 CRHR1P34998 444 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 DPP6P42658 865 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 GCLMP48507 274 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 NFIL3Q16649 462 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 ATP13A4Q4VNC1 1196 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 BEND7Q8N7W2 519 aaPredicted RBP19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 GIMAP1Q8WWP7 306 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 CSF3RQ99062 836 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 ADI1Q9BV57 179 aa19.45■□□□□ 0.7
SEMA4B-215ENST00000560089 RGSL1A5PLK6 1076 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 FGF3P11487 239 aaPredicted RBP19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 CASP3P42574 277 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 PTPN9P43378 593 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 NLRP11P59045 1033 aaKnown RBP19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 CHSY3Q70JA7 882 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 DCAF4Q8WV16 495 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 CFAP36Q96G28 342 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 VCPIP1Q96JH7 1222 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 ZNF717Q9BY31 904 aaPredicted RBP19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 MTRRQ9UBK8 725 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L15C9J2P7 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L13C9JLJ4 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L11C9JVI0 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L18D6R9N7 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L22D6RA61 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L17D6RBQ6 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L19D6RCP7 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L20D6RJB6 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 ZNF195O14628 629 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 TOR1BO14657 336 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 UGT2B4P06133 528 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 NCAM1P13591 858 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 MRPS15P82914 257 aaKnown RBP19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 VAC14Q08AM6 782 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L24Q0WX57 530 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 USP17L6PQ6QN14 398 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 SNX19Q92543 992 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms