RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 PLAC1Q9HBJ0 212 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 PIH1D1Q9NWS0 290 aaKnown RBP23.96■■□□□ 1.43
TM2D3-209ENST00000560013 A0A1B0GVM2 712 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 TCAF2A6NFQ2 919 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 GREM1O60565 184 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 USP12O75317 370 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 CKMP06732 381 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 PFKLP17858 780 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 SGSHP51688 502 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 GNA12Q03113 381 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 SLC10A7Q0GE19 358 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 EFTUD2Q15029 972 aaKnown RBP eCLIP23.96■■□□□ 1.43
TM2D3-209ENST00000560013 TTC39BQ5VTQ0 682 aaPredicted RBP23.96■■□□□ 1.43
TM2D3-209ENST00000560013 CASC4Q6P4E1 433 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 SPATA22Q8NHS9 363 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 GSDMBQ8TAX9 411 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 ARNTL2Q8WYA1 636 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 TGS1Q96RS0 853 aaKnown RBP23.96■■□□□ 1.43
TM2D3-209ENST00000560013 NAT9Q9BTE0 207 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 PSMC3IPQ9P2W1 217 aaPredicted RBP23.96■■□□□ 1.43
TM2D3-209ENST00000560013 PCDHA11Q9Y5I1 949 aa23.96■■□□□ 1.43
TM2D3-209ENST00000560013 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.95■■□□□ 1.42
TM2D3-209ENST00000560013 TRAV19A0A0A6YYK7 116 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 A6NNZ2 444 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 TSPAN3O60637 253 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 ZNF177Q13360 481 aaPredicted RBP23.95■■□□□ 1.42
TM2D3-209ENST00000560013 TMED2Q15363 201 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 TUBB8Q3ZCM7 444 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 KBTBD12Q3ZCT8 623 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 Q6ZNB5 142 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 LINC00523Q86TU6 105 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 TEX26Q8N6G2 289 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 DNAAF3Q8N9W5 541 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 MRRFQ96E11 262 aaKnown RBP23.95■■□□□ 1.42
TM2D3-209ENST00000560013 PAFAH2Q99487 392 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 DHRS4Q9BTZ2 278 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 HCFC1R1Q9NWW0 138 aa23.95■■□□□ 1.42
TM2D3-209ENST00000560013 A0A0D9SEW6 157 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 AP3B1O00203 1094 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 CLASP2O75122 1294 aaKnown RBP23.94■■□□□ 1.42
TM2D3-209ENST00000560013 RFPL2O75678 378 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 MT-CYBP00156 380 aaPredicted RBP23.94■■□□□ 1.42
TM2D3-209ENST00000560013 GJA1P17302 382 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 MSH2P43246 934 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 GEMP55040 296 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 CRADDP78560 199 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 TNK2Q07912 1038 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 NR1H3Q13133 447 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 PDE12Q6L8Q7 609 aaKnown RBP23.94■■□□□ 1.42
TM2D3-209ENST00000560013 ADGRD1Q6QNK2 874 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 SETD3Q86TU7 594 aaPredicted RBP23.94■■□□□ 1.42
TM2D3-209ENST00000560013 CNOT10Q9H9A5 744 aaKnown RBP23.94■■□□□ 1.42
TM2D3-209ENST00000560013 SYBUQ9NX95 663 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 BFARQ9NZS9 450 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 LSM7Q9UK45 103 aaKnown RBP23.94■■□□□ 1.42
TM2D3-209ENST00000560013 PRAMEF11O60813 436 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 PIAS1O75925 651 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 FGF19O95750 216 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 PTPN2P17706 415 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 PRKCHP24723 683 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 HOXA9P31269 272 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 EPHA5P54756 1037 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 OR52K2Q8NGK3 314 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 TRIM56Q9BRZ2 755 aaKnown RBP23.94■■□□□ 1.42
TM2D3-209ENST00000560013 ZMYND15Q9H091 742 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 NT5MQ9NPB1 228 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 TBC1D30Q9Y2I9 924 aa23.94■■□□□ 1.42
TM2D3-209ENST00000560013 ILVBLA1L0T0 632 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 NRG2O14511 850 aaPredicted RBP23.93■■□□□ 1.42
TM2D3-209ENST00000560013 C1QAP02745 245 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 EPCAMP16422 314 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 CCR2P41597 374 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 MAGEA10P43363 369 aaPredicted RBP23.93■■□□□ 1.42
TM2D3-209ENST00000560013 NPY2RP49146 381 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 ERVK-21P61565 698 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 STXBP5Q5T5C0 1151 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 STEAP4Q687X5 459 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 CYS1Q717R9 158 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 PRPF39Q86UA1 669 aaKnown RBP23.93■■□□□ 1.42
TM2D3-209ENST00000560013 SLC46A2Q9BY10 475 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 SLC25A51Q9H1U9 297 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 MYO7AQ13402 2215 aa23.93■■□□□ 1.42
TM2D3-209ENST00000560013 HELZP42694 1942 aaKnown RBP23.92■■□□□ 1.42
TM2D3-209ENST00000560013 SHOX2O60902 331 aaPredicted RBP23.92■■□□□ 1.42
TM2D3-209ENST00000560013 RHOCP08134 193 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 PGAM1P18669 254 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 MDH1P40925 334 aaKnown RBP23.92■■□□□ 1.42
TM2D3-209ENST00000560013 CDH17Q12864 832 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 GPM6BQ13491 265 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 IL31Q6EBC2 164 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 HTR3DQ70Z44 454 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 FAM217AQ8IXS0 508 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 OR7D4Q8NG98 312 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 APOL2Q9BQE5 337 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 SAMD15Q9P1V8 674 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 ZNF510Q9Y2H8 683 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 SH3BP1Q9Y3L3 701 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 ACTL7BQ9Y614 415 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 FOXO6A8MYZ6 492 aa23.92■■□□□ 1.42
TM2D3-209ENST00000560013 SCAMP3O14828 347 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms