RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CYB5R4Q7L1T6 521 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 SRFBP1Q8NEF9 429 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 SGCDQ92629 289 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 SEC31BQ9NQW1 1179 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 OPTCQ9UBM4 332 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 DDX20Q9UHI6 824 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 RAB23Q9ULC3 237 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 C2CD2Q9Y426 696 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 MFHAS1Q9Y4C4 1052 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 DAGLAQ9Y4D2 1042 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 RRN3P2A6NIE6 340 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 PTX3P26022 381 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 LCN1P1Q5VSP4 162 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 PAGE2Q7Z2X7 111 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ANKS1AQ92625 1134 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 PTCD3Q96EY7 689 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 PHB2Q99623 299 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 DMGDHQ9UI17 866 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 FOXN3O00409 490 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 TCF7P36402 384 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 RPL10AP62906 217 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 SRSF11Q05519 484 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF234Q14588 700 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 TKFCQ3LXA3 575 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ADGRG2Q8IZP9 1017 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 OXER1Q8TDS5 423 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 TEFMQ96QE5 360 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 EXD2Q9NVH0 621 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 THG1LQ9NWX6 298 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 CDHR2Q9BYE9 1310 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 NPTXRO95502 500 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ANO7Q6IWH7 933 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 KCNMB4Q86W47 210 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF548Q8NEK5 533 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 FBXO30Q8TB52 745 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZSWIM1Q9BR11 485 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 TAF6LQ9Y6J9 622 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 MYBP10242 640 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 EPHB3P54753 998 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 N4BP2L1Q5TBK1 243 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 QSOX2Q6ZRP7 698 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 GLT6D1Q7Z4J2 308 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 SEMA4DQ92854 862 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 RNF31Q96EP0 1072 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 MND1Q9BWT6 205 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 ERVV-1B6SEH8 477 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 GRK5P34947 590 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ATXN1P54253 815 aaKnown RBP14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 SSTP61278 116 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 NAA20P61599 178 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 EFCAB12Q6NXP0 572 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 TTLL6Q8N841 843 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 EIF1ADQ8N9N8 165 aaKnown RBP14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 INO80EQ8NBZ0 244 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 BSNDQ8WZ55 320 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 MASTLQ96GX5 879 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 FNDC11Q9BVV2 318 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 A0A087WZ62 844 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ABHD14A-ACY1A0A1B0GW23 586 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 URADA6NGE7 173 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 FBXO21O94952 628 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 TDP2O95551 362 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ITGB3P05106 788 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 NR2C2P49116 596 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ARPC4P59998 168 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 PPIL2Q13356 520 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ITIH5Q86UX2 942 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 TDRPQ86YL5 185 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF567Q8N184 647 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 SETD6Q8TBK2 473 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 PMM1Q92871 262 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF607Q96SK3 696 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ACE2Q9BYF1 805 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 SLC39A8Q9C0K1 460 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 IFNA16P05015 189 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 CTSHP09668 335 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 CXCR2P25025 360 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 CUL2Q13617 745 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 USP41Q3LFD5 358 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 NOL9Q5SY16 702 aaKnown RBP14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 FNBP1LQ5T0N5 605 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 OR52K2Q8NGK3 314 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 TSPAN18Q96SJ8 248 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 MGME1Q9BQP7 344 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ABCG2Q9UNQ0 655 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 ALG5Q9Y673 324 aa14.02□□□□□ -0.16
CSPG4P12-202ENST00000559989 TFECO14948 347 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 NUAK1O60285 661 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 REM1O75628 298 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 CSH1P0DML2 217 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 CSH2P0DML3 217 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 IGFALSP35858 605 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 LSM3P62310 102 aaKnown RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 PPM1LQ5SGD2 360 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 COLGALT1Q8NBJ5 622 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 PNMA5Q96PV4 448 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms