RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 DCBLD1Q8N8Z6 715 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 C1orf131Q8NDD1 294 aaKnown RBP13.43□□□□□ -0.26
TPM1-220ENST00000559556 ZNF397Q8NF99 534 aaPredicted RBP13.43□□□□□ -0.26
TPM1-220ENST00000559556 UBL7Q96S82 380 aaPredicted RBP13.43□□□□□ -0.26
TPM1-220ENST00000559556 PSMB7Q99436 277 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 C2orf49Q9BVC5 232 aaPredicted RBP13.43□□□□□ -0.26
TPM1-220ENST00000559556 PIGVQ9NUD9 493 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 RRN3Q9NYV6 651 aa13.43□□□□□ -0.26
TPM1-220ENST00000559556 M0QYT0 321 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 SIGLEC6O43699 453 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 SDC3O75056 442 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 CNTN5O94779 1100 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 ZNF18P17022 549 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 ITPKBP27987 946 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 KRT83P78385 493 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 INSM1Q01101 510 aaPredicted RBP13.42□□□□□ -0.26
TPM1-220ENST00000559556 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 APBA1Q02410 837 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 ZNF211Q13398 564 aaPredicted RBP13.42□□□□□ -0.26
TPM1-220ENST00000559556 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 BRMS1LQ5PSV4 323 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 OR6B2Q6IFH4 312 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 ZNF683Q8IZ20 524 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 OR2A12Q8NGT7 310 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 OR4C6Q8NH72 309 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 NT5C3BQ969T7 300 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 KLHDC7BQ96G42 594 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 CCDC114Q96M63 670 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 NPY6RQ99463 290 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 MUC3BQ9H195 1237 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 PRORYQ9H606 182 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 ARHGEF38Q9NXL2 777 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 VPS51Q9UID3 782 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 RWDD2AQ9UIY3 292 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 CLCA2Q9UQC9 943 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 CA5BQ9Y2D0 317 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
TPM1-220ENST00000559556 AK5Q9Y6K8 562 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 BSNQ9UPA5 3926 aa13.42□□□□□ -0.26
TPM1-220ENST00000559556 A0A1W2PQU0 124 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 EIF4E1BA6NMX2 242 aaKnown RBP13.41□□□□□ -0.26
TPM1-220ENST00000559556 I6L893 689 aaPredicted RBP13.41□□□□□ -0.26
TPM1-220ENST00000559556 KPNA3O00505 521 aaPredicted RBP13.41□□□□□ -0.26
TPM1-220ENST00000559556 TRIM38O00635 465 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 BNIP3LO60238 219 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 ADCY5O95622 1261 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 MT-CO1P00395 513 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 RHOCP08134 193 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 THEGLP0DJG4 465 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 PRLRP16471 622 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 GLDCP23378 1020 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 DGKAP23743 735 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 PON1P27169 355 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 CHRNA3P32297 505 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 CXCR3P49682 368 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 CLCN6P51797 869 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 SNX16P57768 344 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 PTK2Q05397 1052 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 KCNMA1Q12791 1236 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 BECN1Q14457 450 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 ZNF284Q2VY69 593 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 ALFQ53S48 1182 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 LRRC69Q6ZNQ3 347 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 SETD3Q86TU7 594 aaPredicted RBP13.41□□□□□ -0.26
TPM1-220ENST00000559556 HORMAD1Q86X24 394 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 ZDHHC17Q8IUH5 632 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 SLC25A45Q8N413 288 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 TMIEQ8NEW7 156 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 BAP1Q92560 729 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 ARRDC3Q96B67 414 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 PGAP3Q96FM1 320 aaPredicted RBP13.41□□□□□ -0.26
TPM1-220ENST00000559556 SIK2Q9H0K1 926 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 SIX2Q9NPC8 291 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 ANLNQ9NQW6 1124 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 KLHL11Q9NVR0 708 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 AJAP1Q9UKB5 411 aaPredicted RBP13.41□□□□□ -0.26
TPM1-220ENST00000559556 FLNCQ14315 2725 aa13.41□□□□□ -0.26
TPM1-220ENST00000559556 IGLV3-10A0A075B6K4 115 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 TK2O00142 265 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 SLC31A1O15431 190 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 RRP8O43159 456 aaKnown RBP13.4□□□□□ -0.26
TPM1-220ENST00000559556 BRINP1O60477 761 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 SNAP91O60641 907 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 GADD45BO75293 160 aaPredicted RBP13.4□□□□□ -0.26
TPM1-220ENST00000559556 PRNPP04156 253 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 TFE3P19532 575 aaPredicted RBP13.4□□□□□ -0.26
TPM1-220ENST00000559556 HNRNPA2B1P22626 353 aaKnown RBP13.4□□□□□ -0.26
TPM1-220ENST00000559556 RRM1P23921 792 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 CLCN1P35523 988 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 KRT9P35527 623 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 E2F1Q01094 437 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 CCDC15Q0P6D6 951 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 TMEM259Q4ZIN3 620 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 ARTNQ5T4W7 220 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 C22orf39Q6P5X5 142 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 ABI3BPQ7Z7G0 1075 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 SLC47A2Q86VL8 602 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 ATP11CQ8NB49 1132 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms