RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 LINGO4Q6UY18 593 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 DSG4Q86SJ6 1040 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 ATP11CQ8NB49 1132 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 OR2I1PQ8NGU4 316 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 GANCQ8TET4 914 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 ZNF653Q96CK0 615 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 IQCDQ96DY2 449 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 OMDQ99983 421 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 ORAI3Q9BRQ5 295 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 GTPBP2Q9BX10 602 aaKnown RBP11.2□□□□□ -0.62
SPG11-216ENST00000559347 NEUROG2Q9H2A3 272 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 RETREG1Q9H6L5 497 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 ATP13A1Q9HD20 1204 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 PARVAQ9NVD7 372 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 SARDHQ9UL12 918 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 FZD10Q9ULW2 581 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 FRYQ5TBA9 3013 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 FAM47DPA6NHR8 397 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 C1QTNF3-AMACRE9PGA6 284 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 BCAT2O15382 392 aaPredicted RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 SMAD6O43541 496 aaKnown RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 BNIP3LO60238 219 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 RTN2O75298 545 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 GJB3O75712 270 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 FSBPO95073 299 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 KCNK5O95279 499 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 CTSLP07711 333 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 SYPP08247 313 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 ADRB1P08588 477 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 GOT1P17174 413 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 DESP17661 470 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 PSMA2P25787 234 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 L1CAMP32004 1257 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 ETFBP38117 255 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 SERPINH1P50454 418 aaKnown RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 ATXN3P54252 364 aaPredicted RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 GALCP54803 685 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 ZBED6P86452 979 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 BNC1Q01954 994 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 UAP1L1Q3KQV9 507 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 AGBL4Q5VU57 503 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 SCYL2Q6P3W7 929 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 NCEH1Q6PIU2 408 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 HDDC3Q8N4P3 179 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 OR2A12Q8NGT7 310 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 OR2T34Q8NGX1 318 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 PIP4K2CQ8TBX8 421 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 FNIP1Q8TF40 1166 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 SYN2Q92777 582 aaPredicted RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 ARHGEF2Q92974 986 aaKnown RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 CCDC114Q96M63 670 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 ACE2Q9BYF1 805 aaPredicted RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 TRIM7Q9C029 511 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 XPO4Q9C0E2 1151 aaKnown RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 ISCUQ9H1K1 167 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 OSGEPQ9NPF4 335 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 CNOT8Q9UFF9 292 aaKnown RBP11.19□□□□□ -0.62
SPG11-216ENST00000559347 DNAI1Q9UI46 699 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 PPM1HQ9ULR3 514 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 CAPN11Q9UMQ6 739 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 SCINQ9Y6U3 715 aa11.19□□□□□ -0.62
SPG11-216ENST00000559347 CXorf51AA0A1B0GTR3 108 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 TMEM191CA6NGB0 347 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 LRRC72A6NJI9 287 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 PLK4O00444 970 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 SLC7A4O43246 635 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 PLRG1O43660 514 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 OPHN1O60890 802 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 RAMP2O60895 175 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 ZNF821O75541 412 aaPredicted RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 CD160O95971 181 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 FTLP02792 175 aaPredicted RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 SERPING1P05155 500 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 MYBL1P10243 752 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 CSRP1P21291 193 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 CD27P26842 260 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 EPHB2P29323 1055 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 ACVRL1P37023 503 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 GRIA4P48058 902 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 NOVA1P51513 510 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 AFF3P51826 1226 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 PPP2CBP62714 309 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 PPP2CAP67775 309 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 POM121L1PQ3SYA9 428 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 FAM46CQ5VWP2 391 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 PSAPL1Q6NUJ1 521 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 RETSATQ6NUM9 610 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 CYP4V2Q6ZWL3 525 aaPredicted RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 ARFGAP1Q8N6T3 406 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 PCDH20Q8N6Y1 951 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 RTL3Q8N8U3 475 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 PEBP4Q96S96 227 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 EPAS1Q99814 870 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 SPON2Q9BUD6 331 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 SNRNP25Q9BV90 132 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 ZDHHC5Q9C0B5 715 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms