RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NHLH1Q02575 133 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 DGKKQ5KSL6 1271 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CWF19L1Q69YN2 538 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 ALG1LQ6GMV1 187 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 MAMSTRQ6ZN01 415 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 BZW1Q7L1Q6 419 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CCDC105Q8IYK2 499 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 SH2D3CQ8N5H7 860 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 PRELID2Q8N945 189 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 C12orf50Q8NA57 414 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 TTC13Q8NBP0 860 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 FRS2Q8WU20 508 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 CASKIN2Q8WXE0 1202 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 NKD2Q969F2 451 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 MS4A14Q96JA4 679 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 MUC3BQ9H195 1237 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 RNF14Q9UBS8 474 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 IPO11Q9UI26 975 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 ERVW-1Q9UQF0 538 aa15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 MTF2Q9Y483 593 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-207ENST00000559309 BCLAF3A2AJT9 711 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 TBC1D3BA6NDS4 549 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 HACD1B0YJ81 288 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 PGRMC1O00264 195 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 PDE2AO00408 941 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 MATN3O15232 486 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 MT-CO1P00395 513 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 SRCP12931 536 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 POLR2EP19388 210 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 RPS9P46781 194 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 SERPINH1P50454 418 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 CLCN6P51797 869 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 DYNLT1P63172 113 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 MRPS21P82921 87 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 GRSF1Q12849 480 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 PDK1Q15118 436 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 CCNG2Q16589 344 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 HSF5Q4G112 596 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 PLPP6Q8IY26 295 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 PJA1Q8NG27 643 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 USP33Q8TEY7 942 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 MAIP1Q8WWC4 291 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 P3H4Q92791 437 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 ISG20Q96AZ6 181 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 QKIQ96PU8 341 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 IL12RB2Q99665 862 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 GABRG3Q99928 467 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 TBC1D17Q9HA65 648 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 USP29Q9HBJ7 922 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 MRPS17Q9Y2R5 130 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 HEY1Q9Y5J3 304 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 CACNA1HO95180 2353 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 SHROOM3Q8TF72 1996 aa15.11■□□□□ 0.01
SNRPA1-207ENST00000559309 MYO18AQ92614 2054 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 ZDBF2Q9HCK1 2354 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 SMAD6O43541 496 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 LIASO43766 372 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 MAP3K6O95382 1288 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 ATP5BP06576 529 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 VAV1P15498 845 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 IFI35P80217 286 aaPredicted RBP15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 HNRNPDQ14103 355 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 GAS6Q14393 721 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 ZNF234Q14588 700 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 RFTN1Q14699 578 aaPredicted RBP15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 EMC10Q5UCC4 262 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 EGFLAMQ63HQ2 1017 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 RETSATQ6NUM9 610 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 NUDT18Q6ZVK8 323 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 BMP8AQ7Z5Y6 402 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 IL17RCQ8NAC3 791 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 SORCS1Q8WY21 1168 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 RTP4Q96DX8 246 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 LGMNQ99538 433 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 CEP44Q9C0F1 390 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 AMACRQ9UHK6 382 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 SLCO3A1Q9UIG8 710 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 FBXL21Q9UKT6 434 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 ACTL7AQ9Y615 435 aa15.1■□□□□ 0.01
SNRPA1-207ENST00000559309 CBX4O00257 560 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 DFFAO00273 331 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 ADAM23O75077 832 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 CR2P20023 1033 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 IL12RB1P42701 662 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 STK19P49842 368 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 GEMIN4P57678 1058 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 WASHC5Q12768 1159 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 E2F5Q15329 346 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 CYTH1Q15438 398 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 SLC45A4Q5BKX6 768 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 TMCO4Q5TGY1 634 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 IL31Q6EBC2 164 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 METTL3Q86U44 580 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 CCDC13Q8IYE1 715 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 ATPAF2Q8N5M1 289 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 CCDC26Q8TAB7 109 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 PSKH2Q96QS6 385 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 ACOX2Q99424 681 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 SPON2Q9BUD6 331 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 FOXQ1Q9C009 403 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms