RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 JCHAINP01591 159 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 ASGR2P07307 311 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 RPL22P35268 128 aaKnown RBP18.44■□□□□ 0.54
CLPX-203ENST00000558958 OPRD1P41143 372 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 SLC6A11P48066 632 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 ARF5P84085 180 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 TEX44Q53QW1 395 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 FAM182AQ5T1J6 154 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 ZNF567Q8N184 647 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 CCDC110Q8TBZ0 833 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 ACDQ96AP0 544 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 CHFRQ96EP1 664 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 ZNF419Q96HQ0 510 aaPredicted RBP18.44■□□□□ 0.54
CLPX-203ENST00000558958 SPATA13Q96N96 652 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 ERP44Q9BS26 406 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 CEP41Q9BYV8 373 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 THEGQ9P2T0 379 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 DEC1Q9P2X7 70 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLPX-203ENST00000558958 V9GYY5 206 aaPredicted RBP18.44■□□□□ 0.54
CLPX-203ENST00000558958 COL4A3Q01955 1670 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 SHROOM3Q8TF72 1996 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 CXorf51AA0A1B0GTR3 108 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 EIF2DP41214 584 aaKnown RBP18.43■□□□□ 0.54
CLPX-203ENST00000558958 RENBPP51606 427 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 SLC10A7Q0GE19 358 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 GEN1Q17RS7 908 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 ERCC6LQ2NKX8 1250 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 ANKRD20A2Q5SQ80 823 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 TMCO4Q5TGY1 634 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 ANKRD20A1Q5TYW2 823 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 MARC1Q5VT66 337 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 ANKRD20A3Q5VUR7 823 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 GRAMD4Q6IC98 578 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 LEKR1Q6ZMV7 388 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 ADIPOR2Q86V24 386 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 ADHFE1Q8IWW8 467 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 AHI1Q8N157 1196 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 TEX26Q8N6G2 289 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 MYRIPQ8NFW9 859 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 CCHCR1Q8TD31 782 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 CSGALNACT1Q8TDX6 532 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 NSMCE1Q8WV22 266 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 TEKT5Q96M29 485 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 UBA2Q9UBT2 640 aaPredicted RBP18.43■□□□□ 0.54
CLPX-203ENST00000558958 TRHDEQ9UKU6 1024 aa18.43■□□□□ 0.54
CLPX-203ENST00000558958 UTP11Q9Y3A2 253 aaKnown RBP18.43■□□□□ 0.54
CLPX-203ENST00000558958 BHMG1C9JSJ3 638 aaPredicted RBP18.42■□□□□ 0.54
CLPX-203ENST00000558958 OPHN1O60890 802 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 CD160O95971 181 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 ACTN2P35609 894 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 MESP2Q0VG99 397 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 RFTN1Q14699 578 aaPredicted RBP18.42■□□□□ 0.54
CLPX-203ENST00000558958 LBRQ14739 615 aaKnown RBP18.42■□□□□ 0.54
CLPX-203ENST00000558958 TMEM215Q68D42 235 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 DUPD1Q68J44 220 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 RETSATQ6NUM9 610 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 PHTF2Q8N3S3 785 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 CNTD1Q8N815 330 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 WFIKKN2Q8TEU8 576 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 USP33Q8TEY7 942 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 TTC17Q96AE7 1141 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 RAB17Q9H0T7 212 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 ANKZF1Q9H8Y5 726 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 RBM22Q9NW64 420 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLPX-203ENST00000558958 PAK5Q9P286 719 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 KLHL8Q9P2G9 620 aaPredicted RBP18.42■□□□□ 0.54
CLPX-203ENST00000558958 PRKAG3Q9UGI9 489 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 ASIC3Q9UHC3 531 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 ACTL7AQ9Y615 435 aa18.42■□□□□ 0.54
CLPX-203ENST00000558958 TARSL2A2RTX5 802 aaKnown RBP18.41■□□□□ 0.54
CLPX-203ENST00000558958 IVDP26440 423 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 VPS41P49754 854 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 GUCY2DQ02846 1103 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 SULT2A1Q06520 285 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 INO80DQ53TQ3 878 aaPredicted RBP18.41■□□□□ 0.54
CLPX-203ENST00000558958 MBLAC2Q68D91 279 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 NAIF1Q69YI7 327 aaPredicted RBP18.41■□□□□ 0.54
CLPX-203ENST00000558958 LINGO4Q6UY18 593 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 C4orf22Q6V702 233 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 ARHGEF18Q6ZSZ5 1173 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 PID1Q7Z2X4 250 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 SEC14L1Q92503 715 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 DNASE1L2Q92874 299 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 AGAP3Q96P47 875 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 HINFPQ9BQA5 517 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 EPC1Q9H2F5 836 aa18.41■□□□□ 0.54
CLPX-203ENST00000558958 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 ZBTB24O43167 697 aaPredicted RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 CTIFO43310 598 aaKnown RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 MT-CO1P00395 513 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 POLR2EP19388 210 aaKnown RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 CD68P34810 354 aaPredicted RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 ADCY8P40145 1251 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 CTSOP43234 321 aaPredicted RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 MMP13P45452 471 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 SOX9P48436 509 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 DRG2P55039 364 aaKnown RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 GEMIN4P57678 1058 aaKnown RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 ZP2Q05996 745 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms